Details
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Bug
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Status: Closed (View Workflow)
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Critical
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Resolution: Fixed
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10.1.2
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Description
While running the following command:
ALTER TABLE `feed_properties` CHANGE `label_1` `label_1` varchar(1 |
00) DEFAULT NULL |
MySQL(MariaDB) goes away.
ERROR_LOG:
2014-12-25 20:02:33 7f14fee87700 InnoDB: Error: Column last_update in table "mysql"."innodb_table_stats" is INT UNSIGNED NOT NULL but should be BINARY(4) NOT NULL (type mismatch). [91/483]
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2014-12-25 20:02:33 7f14fee87700 InnoDB: Error: Fetch of persistent statistics requested for table "mangoapps_dev"."tr8n_languages" but the required system tables mysql.innodb_table_stats and
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mysql.innodb_index_stats are not present or have unexpected structure. Using transient stats instead.
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2014-12-25 20:02:34 7f14fee87700 InnoDB: Error: Column last_update in table "mysql"."innodb_table_stats" is INT UNSIGNED NOT NULL but should be BINARY(4) NOT NULL (type mismatch).
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2014-12-25 20:02:34 7f14fee87700 InnoDB: Error: Fetch of persistent statistics requested for table "mangoapps_dev"."tr8n_translation_keys" but the required system tables mysql.innodb_table_st
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ats and mysql.innodb_index_stats are not present or have unexpected structure. Using transient stats instead.
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2014-12-25 20:02:34 7f14fee87700 InnoDB: Error: Column last_update in table "mysql"."innodb_table_stats" is INT UNSIGNED NOT NULL but should be BINARY(4) NOT NULL (type mismatch).
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2014-12-25 20:02:34 7f14fee87700 InnoDB: Error: Fetch of persistent statistics requested for table "mangoapps_dev"."users" but the required system tables mysql.innodb_table_stats and mysql.in
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nodb_index_stats are not present or have unexpected structure. Using transient stats instead.
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2014-12-25 20:02:35 7f14fee87700 InnoDB: Error: Column last_update in table "mysql"."innodb_table_stats" is INT UNSIGNED NOT NULL but should be BINARY(4) NOT NULL (type mismatch).
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2014-12-25 20:02:35 7f14fee87700 InnoDB: Error: Fetch of persistent statistics requested for table "mangoapps_dev"."feed_settings" but the required system tables mysql.innodb_table_stats and
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mysql.innodb_index_stats are not present or have unexpected structure. Using transient stats instead.
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2014-12-25 20:02:35 7f14fee87700 InnoDB: Error: Column last_update in table "mysql"."innodb_table_stats" is INT UNSIGNED NOT NULL but should be BINARY(4) NOT NULL (type mismatch).
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2014-12-25 20:02:35 7f14fee87700 InnoDB: Error: Fetch of persistent statistics requested for table "mangoapps_dev"."global_settings" but the required system tables mysql.innodb_table_stats an
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d mysql.innodb_index_stats are not present or have unexpected structure. Using transient stats instead.
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2014-12-25 20:02:37 7f14fee87700 InnoDB: Error: Column last_update in table "mysql"."innodb_table_stats" is INT UNSIGNED NOT NULL but should be BINARY(4) NOT NULL (type mismatch).
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2014-12-25 20:02:37 7f14fee87700 InnoDB: Error: Fetch of persistent statistics requested for table "mangoapps_dev"."tasks" but the required system tables mysql.innodb_table_stats and mysql.in
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nodb_index_stats are not present or have unexpected structure. Using transient stats instead.
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2014-12-25 20:02:37 7f14fee87700 InnoDB: Error: Column last_update in table "mysql"."innodb_table_stats" is INT UNSIGNED NOT NULL but should be BINARY(4) NOT NULL (type mismatch).
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2014-12-25 20:02:37 7f14fee87700 InnoDB: Error: Fetch of persistent statistics requested for table "mangoapps_dev"."events" but the required system tables mysql.innodb_table_stats and mysql.i
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nnodb_index_stats are not present or have unexpected structure. Using transient stats instead.
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2014-12-25 20:02:37 7f14fee87700 InnoDB: Error: Column last_update in table "mysql"."innodb_table_stats" is INT UNSIGNED NOT NULL but should be BINARY(4) NOT NULL (type mismatch).
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2014-12-25 20:02:37 7f14fee87700 InnoDB: Error: Fetch of persistent statistics requested for table "mangoapps_dev"."site_pages" but the required system tables mysql.innodb_table_stats and mys
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ql.innodb_index_stats are not present or have unexpected structure. Using transient stats instead.
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2014-12-25 20:02:38 7f14fee87700 InnoDB: Error: Column last_update in table "mysql"."innodb_table_stats" is INT UNSIGNED NOT NULL but should be BINARY(4) NOT NULL (type mismatch).
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2014-12-25 20:02:38 7f14fee87700 InnoDB: Error: Fetch of persistent statistics requested for table "mangoapps_dev"."wikis" but the required system tables mysql.innodb_table_stats and mysql.in
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nodb_index_stats are not present or have unexpected structure. Using transient stats instead.
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2014-12-25 20:02:38 7f14fee87700 InnoDB: Error: Column last_update in table "mysql"."innodb_table_stats" is INT UNSIGNED NOT NULL but should be BINARY(4) NOT NULL (type mismatch).
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2014-12-25 20:02:38 7f14fee87700 InnoDB: Error: Fetch of persistent statistics requested for table "mangoapps_dev"."todos" but the required system tables mysql.innodb_table_stats and mysql.in
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nodb_index_stats are not present or have unexpected structure. Using transient stats instead.
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2014-12-25 20:02:38 7f14fee87700 InnoDB: Error: Column last_update in table "mysql"."innodb_table_stats" is INT UNSIGNED NOT NULL but should be BINARY(4) NOT NULL (type mismatch).
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2014-12-25 20:02:38 7f14fee87700 InnoDB: Error: Fetch of persistent statistics requested for table "mangoapps_dev"."domains" but the required system tables mysql.innodb_table_stats and mysql.
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innodb_index_stats are not present or have unexpected structure. Using transient stats instead.
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2014-12-25 20:02:39 7f14fee87700 InnoDB: Error: Column last_update in table "mysql"."innodb_table_stats" is INT UNSIGNED NOT NULL but should be BINARY(4) NOT NULL (type mismatch).
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2014-12-25 20:02:39 7f14fee87700 InnoDB: Error: Fetch of persistent statistics requested for table "mangoapps_dev"."presence_options" but the required system tables mysql.innodb_table_stats a
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nd mysql.innodb_index_stats are not present or have unexpected structure. Using transient stats instead.
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2014-12-25 20:02:43 7f14fee87700 InnoDB: Error: Column last_update in table "mysql"."innodb_table_stats" is INT UNSIGNED NOT NULL but should be BINARY(4) NOT NULL (type mismatch).
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2014-12-25 20:02:43 7f14fee87700 InnoDB: Error: Fetch of persistent statistics requested for table "mangoapps_dev"."schema_migrations" but the required system tables mysql.innodb_table_stats
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and mysql.innodb_index_stats are not present or have unexpected structure. Using transient stats instead.
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2014-12-25 20:02:43 7f14fee87700 InnoDB: Error: Column last_update in table "mysql"."innodb_table_stats" is INT UNSIGNED NOT NULL but should be BINARY(4) NOT NULL (type mismatch).
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2014-12-25 20:02:43 7f14fee87700 InnoDB: Error: Fetch of persistent statistics requested for table "mangoapps_dev"."feed_properties" but the required system tables mysql.innodb_table_stats an
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d mysql.innodb_index_stats are not present or have unexpected structure. Using transient stats instead.
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141225 20:02:45 [ERROR] mysqld got signal 11 ; [45/483]
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This could be because you hit a bug. It is also possible that this binary
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or one of the libraries it was linked against is corrupt, improperly built,
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or misconfigured. This error can also be caused by malfunctioning hardware.
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To report this bug, see http://kb.askmonty.org/en/reporting-bugs
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We will try our best to scrape up some info that will hopefully help
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diagnose the problem, but since we have already crashed,
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something is definitely wrong and this may fail.
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Server version: 10.1.2-MariaDB-wsrep
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key_buffer_size=134217728
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read_buffer_size=131072
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max_used_connections=1
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max_threads=153
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thread_count=1
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It is possible that mysqld could use up to
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key_buffer_size + (read_buffer_size + sort_buffer_size)*max_threads = 467237 K bytes of memory
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Hope that's ok; if not, decrease some variables in the equation.
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Thread pointer: 0x0x7f14e8ff3008
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Attempting backtrace. You can use the following information to find out
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where mysqld died. If you see no messages after this, something went
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terribly wrong...
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stack_bottom = 0x7f14fee86cf0 thread_stack 0x48000
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/usr/sbin/mysqld(my_print_stacktrace+0x2e)[0x7f14ff93887e]
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/usr/sbin/mysqld(handle_fatal_signal+0x37d)[0x7f14ff49df2d]
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/lib64/libpthread.so.0(+0x308960f6d0)[0x7f14feaf56d0]
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/usr/sbin/mysqld(thd_get_ha_data+0xa)[0x7f14ff2fd32a]
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/usr/sbin/mysqld(_Z13get_trans_logP3THD+0x31)[0x7f14ff55ee71]
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/usr/sbin/mysqld(wsrep_run_wsrep_commit+0x62c)[0x7f14ff43cfec]
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/usr/sbin/mysqld(+0x71790a)[0x7f14ff63c90a]
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/usr/sbin/mysqld(_ZN7handler12ha_write_rowEPh+0x3bf)[0x7f14ff4a7caf]
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/usr/sbin/mysqld(+0x3555bb)[0x7f14ff27a5bb]
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/usr/sbin/mysqld(_Z17mysql_alter_tableP3THDPcS1_P14HA_CREATE_INFOP10TABLE_LISTP10Alter_infojP8st_orderb+0x3501)[0x7f14ff3b4f91]
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/usr/sbin/mysqld(_ZN19Sql_cmd_alter_table7executeEP3THD+0x65a)[0x7f14ff3f832a]
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/usr/sbin/mysqld(_Z21mysql_execute_commandP3THD+0x182b)[0x7f14ff32dbfb]
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/usr/sbin/mysqld(_Z11mysql_parseP3THDPcjP12Parser_state+0x20b)[0x7f14ff334d5b]
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/usr/sbin/mysqld(_Z16dispatch_command19enum_server_commandP3THDPcj+0x21a5)[0x7f14ff337cc5]
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/usr/sbin/mysqld(_Z10do_commandP3THD+0x134)[0x7f14ff3383f4]
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/usr/sbin/mysqld(_Z24do_handle_one_connectionP3THD+0x18a)[0x7f14ff3f551a]
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/usr/sbin/mysqld(handle_one_connection+0x40)[0x7f14ff3f56e0] [3/483]
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/lib64/libpthread.so.0(+0x3089607ee5)[0x7f14feaedee5]
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/lib64/libc.so.6(clone+0x6d)[0x7f14fcf0db8d]
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Trying to get some variables.
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Some pointers may be invalid and cause the dump to abort.
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Query (0x7f14d1823020): is an invalid pointer
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Connection ID (thread ID): 2
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Status: NOT_KILLED
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Optimizer switch: index_merge=on,index_merge_union=on,index_merge_sort_union=on,index_merge_intersection=on,index_merge_sort_intersection=off,engine_condition_pushdown=off,index_condition_pus
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hdown=on,derived_merge=on,derived_with_keys=on,firstmatch=on,loosescan=on,materialization=on,in_to_exists=on,semijoin=on,partial_match_rowid_merge=on,partial_match_table_scan=on,subquery_cach
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e=on,mrr=off,mrr_cost_based=off,mrr_sort_keys=off,outer_join_with_cache=on,semijoin_with_cache=on,join_cache_incremental=on,join_cache_hashed=on,join_cache_bka=on,optimize_join_buffer_size=of
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f,table_elimination=on,extended_keys=on,exists_to_in=on
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The manual page at http://dev.mysql.com/doc/mysql/en/crashing.html contains
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information that should help you find out what is causing the crash.
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141225 20:02:45 mysqld_safe Number of processes running now: 0
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141225 20:02:45 mysqld_safe mysqld restarted
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141225 20:02:46 mysqld_safe WSREP: Running position recovery with --log_error='/var/lib/mysql/wsrep_recovery.bjEOXw' --pid-file='/var/lib/mysql/c4.pune.mangopulse.com-recover.pid'
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141225 20:02:50 mysqld_safe WSREP: Position recovery skipped
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141225 20:02:50 [Note] InnoDB: Using mutexes to ref count buffer pool pages
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141225 20:02:50 [Note] InnoDB: The InnoDB memory heap is disabled
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141225 20:02:50 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins
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141225 20:02:50 [Note] InnoDB: Memory barrier is not used
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141225 20:02:50 [Note] InnoDB: Compressed tables use zlib 1.2.8
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141225 20:02:50 [Note] InnoDB: Using Linux native AIO
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141225 20:02:50 [Note] InnoDB: Using CPU crc32 instructions
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141225 20:02:50 [Note] InnoDB: Initializing buffer pool, size = 128.0M
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141225 20:02:50 [Note] InnoDB: Completed initialization of buffer pool
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141225 20:02:50 [Note] InnoDB: Highest supported file format is Barracuda.
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141225 20:02:50 [Note] InnoDB: 128 rollback segment(s) are active.
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141225 20:02:50 [Note] InnoDB: Waiting for purge to start
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141225 20:02:50 [Note] InnoDB: Percona XtraDB (http://www.percona.com) 5.6.21-70.0 started; log sequence number 95625746288
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141225 20:02:50 [Note] Plugin 'FEEDBACK' is disabled.
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141225 20:02:50 [Note] Server socket created on IP: '::'.
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141225 20:02:50 [Note] Event Scheduler: Loaded 0 events
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141225 20:02:50 [Note] WSREP: Read nil XID from storage engines, skipping position init
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141225 20:02:50 [Note] WSREP: wsrep_load(): loading provider library 'none'
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2014-12-25 20:02:50 7fbdff6e2700 InnoDB: Error: Column last_update in table "mysql"."innodb_table_stats" is INT UNSIGNED NOT NULL but should be BINARY(4) NOT NULL (type mismatch).
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2014-12-25 20:02:50 7fbdff6e2700 InnoDB: Error: Fetch of persistent statistics requested for table "mysql"."gtid_slave_pos" but the required system tables mysql.innodb_table_stats and mysql.i
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nnodb_index_stats are not present or have unexpected structure. Using transient stats instead.
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141225 20:02:50 [Note] /usr/sbin/mysqld: ready for connections.
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Version: '10.1.2-MariaDB-wsrep' socket: '/var/lib/mysql/mysql.sock' port: 3306 MariaDB Server, wsrep_25.10.r4123
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Attachments
Issue Links
- relates to
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MDEV-7373 Error while running mysql_upgrade
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- Closed
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Thanks for the help elenst.
For users who are using a Rails application and are facing similar problem with their MariaDB servers can apply the following solution (it is a variation from Elena's solution)
mysql> RENAME TABLE feed_properties TO feed_properties_old;
mysql> CREATE TABLE feed_properties LIKE feed_properties_old;
$ bundle exec rake db:migrate
mysql> INSERT INTO feed_properties SELECT * FROM feed_properties_old;
You can optionally drop your old tables in case you are sure about your data integrity.
This will not work if you are also ALTERing/UPDATEing values in other columns of the same table based on certain other properties in your rails migration. In that case you will have to add the above statements in your migration file around the ALTER statement.