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  1. MariaDB Server
  2. MDEV-7373

Error while running mysql_upgrade

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      Description

      Faced an error while running

      #mysql_upgrade -uroot -p

      STDOUT:

      Phase 1/5: Checking mysql database
      Processing databases
      mysql
      mysql.column_stats                                 OK
      mysql.columns_priv                                 OK
      mysql.db                                           OK
      mysql.event                                        OK
      mysql.func                                         OK
      mysql.gtid_slave_pos                               OK
      mysql.help_category                                OK
      mysql.help_keyword                                 OK
      mysql.help_relation                                OK
      mysql.help_topic                                   OK
      mysql.host                                         OK
      mysql.index_stats                                  OK
      mysql.innodb_index_stats                           OK
      mysql.innodb_table_stats                           OK
      mysql.ndb_binlog_index                             OK
      mysql.plugin                                       OK
      mysql.proc                                         OK
      mysql.procs_priv                                   OK
      mysql.proxies_priv                                 OK
      mysql.roles_mapping                                OK
      mysql.servers                                      OK
      mysql.table_stats                                  OK
      mysql.tables_priv                                  OK
      mysql.time_zone                                    OK
      mysql.time_zone_leap_second                        OK
      mysql.time_zone_name                               OK
      mysql.time_zone_transition                         OK
      mysql.time_zone_transition_type                    OK
      mysql.user                                         OK
      Phase 2/5: Running 'mysql_fix_privilege_tables'...
      ERROR 2013 (HY000) at line 584: Lost connection to MySQL server during query
      ERROR 2006 (HY000) at line 585: MySQL server has gone away

      ERROR_LOG_FILE:

      Version: '10.1.2-MariaDB-wsrep'  socket: '/var/lib/mysql/mysql.sock'  port: 3306  MariaDB Server, wsrep_25.10.r4123
      141225 19:56:07 [ERROR] mysqld got signal 11 ;
      This could be because you hit a bug. It is also possible that this binary
      or one of the libraries it was linked against is corrupt, improperly built,
      or misconfigured. This error can also be caused by malfunctioning hardware.
       
      To report this bug, see http://kb.askmonty.org/en/reporting-bugs
       
      We will try our best to scrape up some info that will hopefully help
      diagnose the problem, but since we have already crashed, 
      something is definitely wrong and this may fail.
       
      Server version: 10.1.2-MariaDB-wsrep
      key_buffer_size=134217728
      read_buffer_size=131072
      max_used_connections=2
      max_threads=153
      thread_count=2
      It is possible that mysqld could use up to 
      key_buffer_size + (read_buffer_size + sort_buffer_size)*max_threads = 467237 K  bytes of memory
      Hope that's ok; if not, decrease some variables in the equation.
       
      Thread pointer: 0x0x7f4218fef008
      Attempting backtrace. You can use the following information to find out
      where mysqld died. If you see no messages after this, something went
      terribly wrong...
      stack_bottom = 0x7f422fefbcf0 thread_stack 0x48000
      /usr/sbin/mysqld(my_print_stacktrace+0x2e)[0x7f42309f687e]
      /usr/sbin/mysqld(handle_fatal_signal+0x37d)[0x7f423055bf2d]
      /lib64/libpthread.so.0(+0x308960f6d0)[0x7f422fbb36d0]
      /usr/sbin/mysqld(thd_get_ha_data+0xa)[0x7f42303bb32a]
      /usr/sbin/mysqld(_Z13get_trans_logP3THD+0x31)[0x7f423061ce71]
      /usr/sbin/mysqld(wsrep_run_wsrep_commit+0x62c)[0x7f42304fafec]
      /usr/sbin/mysqld(+0x71790a)[0x7f42306fa90a]
      /usr/sbin/mysqld(_ZN7handler12ha_write_rowEPh+0x3bf)[0x7f4230565caf]
      /usr/sbin/mysqld(+0x3555bb)[0x7f42303385bb]
      /usr/sbin/mysqld(_Z17mysql_alter_tableP3THDPcS1_P14HA_CREATE_INFOP10TABLE_LISTP10Alter_infojP8st_orderb+0x3501)[0x7f4230472f91]
      /usr/sbin/mysqld(_ZN19Sql_cmd_alter_table7executeEP3THD+0x65a)[0x7f42304b632a]
      /usr/sbin/mysqld(_Z21mysql_execute_commandP3THD+0x182b)[0x7f42303ebbfb]
      /usr/sbin/mysqld(_ZN18Prepared_statement7executeEP6Stringb+0x496)[0x7f4230405b96]
      /usr/sbin/mysqld(+0x422d03)[0x7f4230405d03]
      /usr/sbin/mysqld(_Z22mysql_sql_stmt_executeP3THD+0xb3)[0x7f42304062e3]
      /usr/sbin/mysqld(_Z21mysql_execute_commandP3THD+0x1afe)[0x7f42303ebece]
      /usr/sbin/mysqld(_Z11mysql_parseP3THDPcjP12Parser_state+0x20b)[0x7f42303f2d5b]
      /usr/sbin/mysqld(_Z16dispatch_command19enum_server_commandP3THDPcj+0x21a5)[0x7f42303f5cc5]
      /usr/sbin/mysqld(_Z10do_commandP3THD+0x134)[0x7f42303f63f4]
      /usr/sbin/mysqld(_Z24do_handle_one_connectionP3THD+0x18a)[0x7f42304b351a]
      /usr/sbin/mysqld(handle_one_connection+0x40)[0x7f42304b36e0]
      /lib64/libpthread.so.0(+0x3089607ee5)[0x7f422fbabee5]
      /lib64/libc.so.6(clone+0x6d)[0x7f422dfcbb8d]
       
      Trying to get some variables.
      Some pointers may be invalid and cause the dump to abort.
      Query (0x7f42029a54a0): is an invalid pointer
      Connection ID (thread ID): 13
      Status: NOT_KILLED
       
      Optimizer switch: index_merge=on,index_merge_union=on,index_merge_sort_union=on,index_merge_intersection=on,index_merge_sort_intersection=off,engine_condition_pushdown=off,index_condition_pus
      hdown=on,derived_merge=on,derived_with_keys=on,firstmatch=on,loosescan=on,materialization=on,in_to_exists=on,semijoin=on,partial_match_rowid_merge=on,partial_match_table_scan=on,subquery_cach
      e=on,mrr=off,mrr_cost_based=off,mrr_sort_keys=off,outer_join_with_cache=on,semijoin_with_cache=on,join_cache_incremental=on,join_cache_hashed=on,join_cache_bka=on,optimize_join_buffer_size=of
      f,table_elimination=on,extended_keys=on,exists_to_in=on
       
      The manual page at http://dev.mysql.com/doc/mysql/en/crashing.html contains
      information that should help you find out what is causing the crash.
      141225 19:56:08 mysqld_safe Number of processes running now: 0
      141225 19:56:08 mysqld_safe mysqld restarted
      141225 19:56:08 mysqld_safe WSREP: Running position recovery with --log_error='/var/lib/mysql/wsrep_recovery.OABotj' --pid-file='/var/lib/mysql/c4.pune.mangopulse.com-recover.pid'

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              Assignee:
              Unassigned Unassigned
              Reporter:
              ksinkar Koustubh Sinkar
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