Details

    Description

      InnoDB: Assertion failure in file /home/buildbot/buildbot/build/m
      ariadb-10.4.13/storage/innobase/row/row0sel.cc line 3966
       
      InnoDB: We intentionally generate a memory trap.
      InnoDB: Submit a detailed bug report to https://jira.mariadb.org/
      InnoDB: If you get repeated assertion failures or crashes, even
      InnoDB: immediately after the mysqld startup, there may be
      InnoDB: corruption in the InnoDB tablespace. Please refer to
      InnoDB: https://mariadb.com/kb/en/library/innodb-recovery-modes/
      InnoDB: about forcing recovery.
      200628 16:30:52 [ERROR] mysqld got signal 6 ;
      This could be because you hit a bug. It is also possible that this binary
      or one of the libraries it was linked against is corrupt, improperly built,
      or misconfigured. This error can also be caused by malfunctioning hardware.
      To report this bug, see https://mariadb.com/kb/en/reporting-bugs
      We will try our best to scrape up some info that will hopefully help
      diagnose the problem, but since we have already crashed,
      something is definitely wrong and this may fail.
      Server version: 10.4.13-MariaDB-1:10.4.13+maria~focal-log
      key_buffer_size=536870912
      read_buffer_size=16777216
      max_used_connections=10
      max_threads=102
      thread_count=50
      It is possible that mysqld could use up to
      key_buffer_size + (read_buffer_size + sort_buffer_size)*max_threads = 3033535 K  bytes of memory
      Hope that's ok; if not, decrease some variables in the equation.
      Thread pointer: 0x7fcca4000c48
      Attempting backtrace. You can use the following information to find out
      where mysqld died. If you see no messages after this, something went
      terribly wrong...
      stack_bottom = 0x7fcdb2f13da8 thread_stack 0x49000
      /usr/sbin/mysqld(my_print_stacktrace+0x32)[0x5572b70e1fa2]
      /usr/sbin/mysqld(handle_fatal_signal+0x55d)[0x5572b6b78cbd]
      /lib/x86_64-linux-gnu/libpthread.so.0(+0x153c0)[0x7fd12343e3c0]
      /lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7fd122b2d18b]
      /lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7fd122b0c859]
      /usr/sbin/mysqld(+0x599aaa)[0x5572b6858aaa]
      /usr/sbin/mysqld(+0x58e7bc)[0x5572b684d7bc]
      /usr/sbin/mysqld(+0xb72357)[0x5572b6e31357]
      /usr/sbin/mysqld(+0xa8c116)[0x5572b6d4b116]
      /usr/sbin/mysqld(_ZN7handler18ha_index_next_sameEPhPKhj+0x1da)[0x5572b6b80bfa]
      /usr/sbin/mysqld(+0x6e6875)[0x5572b69a5875]
      /usr/sbin/mysqld(_Z10sub_selectP4JOINP13st_join_tableb+0x1d3)[0x5572b6997e33]
      /usr/sbin/mysqld(+0x6c9009)[0x5572b6988009]
      /usr/sbin/mysqld(_Z10sub_selectP4JOINP13st_join_tableb+0x210)[0x5572b6997e70]
      /usr/sbin/mysqld(_ZN4JOIN10exec_innerEv+0xe0e)[0x5572b69c49ce]
      /usr/sbin/mysqld(_ZN4JOIN4execEv+0x37)[0x5572b69c4c27]
      /usr/sbin/mysqld(_Z12mysql_selectP3THDP10TABLE_LISTjR4ListI4ItemEPS4_jP8st_orderS9_S7_S9_yP13select_resultP18st_select_lex_unitP13st_select_lex+0
      x136)[0x5572b69c2d76]
      /usr/sbin/mysqld(_Z13handle_selectP3THDP3LEXP13select_resultm+0x15a)[0x5572b69c375a]
      ut/ut0rbt.cc:458(rbt_eject_node(ib_rbt_node_t*, ib_rbt_node_t*) [clone .part.0])[0x5572b694fca1]
      row/row0sel.cc:2949(row_search_idx_cond_check(unsigned char*, row_prebuilt_t*, unsigned char const*, unsigned short const*) [clone .cold])[0x5572
      b695de52]
      row/row0sel.cc:5266(row_search_mvcc(unsigned char*, page_cur_mode_t, row_prebuilt_t*, unsigned long, unsigned long))[0x5572b69606e3]
      handler/ha_innodb.cc:9543(ha_innobase::general_fetch(unsigned char*, unsigned int, unsigned int))[0x5572b6961098]
      sql/handler.cc:3027(handler::ha_index_next_same(unsigned char*, unsigned char const*, unsigned int))[0x5572b696487c]
      sql/sql_select.cc:21193(join_read_next_same(READ_RECORD*))[0x5572b6964f12]
      sql/records.h:69(READ_RECORD::read_record())[0x5572b6a5544e]
      sql/sql_select.cc:19904(JOIN::exec_inner())[0x5572b6a5556f]
      sql/sql_parse.cc:6359(execute_sqlcom_select(THD*, TABLE_LIST*))[0x5572b7090146]
      /lib/x86_64-linux-gnu/libpthread.so.0(+0x9609)[0x7fd123432609]
      /lib/x86_64-linux-gnu/libc.so.6(clone+0x43)[0x7fd122c09103]
      Trying to get some variables.
      Some pointers may be invalid and cause the dump to abort.
      Query (0x7fcca4025e40): SELECT directory_prefix, s.project_id, s.project_id, s.key, s.value, s.type         FROM redcap_external_modules m
        JOIN redcap_external_module_settings s          ON m.external_module_id = s.external_module_id         WHERE (s.key IN ('version', 'enabled'))
      Connection ID (thread ID): 3142
      Status: KILL_CONNECTION
      Optimizer switch: index_merge=on,index_merge_union=on,index_merge_sort_union=on,index_merge_intersection=on,index_merge_sort_intersection=off,eng
      ine_condition_pushdown=off,index_condition_pushdown=on,derived_merge=on,derived_with_keys=on,firstmatch=on,loosescan=on,materialization=on,in_to_
      exists=on,semijoin=on,partial_match_rowid_merge=on,partial_match_table_scan=on,subquery_cache=on,mrr=off,mrr_cost_based=off,mrr_sort_keys=off,out
      er_join_with_cache=on,semijoin_with_cache=on,join_cache_incremental=on,join_cache_hashed=on,join_cache_bka=on,optimize_join_buffer_size=on,table_
      elimination=on,extended_keys=on,exists_to_in=on,orderby_uses_equalities=on,condition_pushdown_for_derived=on,split_materialized=on,condition_push
      down_for_subquery=on,rowid_filter=on,condition_pushdown_from_having=on
      The manual page at http://dev.mysql.com/doc/mysql/en/crashing.html contains
      information that should help you find out what is causing the crash.
      Writing a core file...
      Working directory at /data/mysql/data
      Resource Limits:
      Limit                     Soft Limit           Hard Limit           Units
      Max cpu time              unlimited            unlimited            seconds
      Max file size             unlimited            unlimited            bytes
      Max data size             unlimited            unlimited            bytes
      Max stack size            8388608              unlimited            bytes
      Max core file size        0                    unlimited            bytes
      Max resident set          unlimited            unlimited            bytes
      Max processes             62401                62401                processes
      Max open files            16364                16364                files
      Max locked memory         65536                65536                bytes
      Max address space         unlimited            unlimited            bytes
      Max file locks            unlimited            unlimited            locks
      Max pending signals       62401                62401                signals
      Max msgqueue size         819200               819200               bytes
      Max nice priority         0                    0
      Max realtime priority     0                    0
      Max realtime timeout      unlimited            unlimited            us
      Core pattern: |/usr/share/apport/apport %p %s %c %d %P ...
      Jun 28 16:30:57 redcap-db02 systemd[1]: mariadb.service: Main process exited, code=killed, status=6/ABRT
      Jun 28 16:30:57 redcap-db02 systemd[1]: mariadb.service: Failed with result 'signal'.
      Jun 28 16:31:02 redcap-db02 systemd[1]: mariadb.service: Scheduled restart job, restart counter is at 1.
      Jun 28 16:31:02 redcap-db02 systemd[1]: Stopped MariaDB 10.4.13 database server.
      

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            Joseph.Nahmias@mountsinai.org Joseph Nahmias created issue -
            Joseph.Nahmias@mountsinai.org Joseph Nahmias made changes -
            Field Original Value New Value
            Description InnoDB: Assertion failure in file /home/buildbot/buildbot/build/m
            ariadb-10.4.13/storage/innobase/row/row0sel.cc line 3966

            {{InnoDB: We intentionally generate a memory trap.
            InnoDB: Submit a detailed bug report to https://jira.mariadb.org/
            InnoDB: If you get repeated assertion failures or crashes, even
            InnoDB: immediately after the mysqld startup, there may be
            InnoDB: corruption in the InnoDB tablespace. Please refer to
            InnoDB: https://mariadb.com/kb/en/library/innodb-recovery-modes/
            InnoDB: about forcing recovery.
            200628 16:30:52 [ERROR] mysqld got signal 6 ;
            This could be because you hit a bug. It is also possible that this binary
            or one of the libraries it was linked against is corrupt, improperly built,
            or misconfigured. This error can also be caused by malfunctioning hardware.
            To report this bug, see https://mariadb.com/kb/en/reporting-bugs
            We will try our best to scrape up some info that will hopefully help
            diagnose the problem, but since we have already crashed,
            something is definitely wrong and this may fail.
            Server version: 10.4.13-MariaDB-1:10.4.13+maria~focal-log
            key_buffer_size=536870912
            read_buffer_size=16777216
            max_used_connections=10
            max_threads=102
            thread_count=50
            It is possible that mysqld could use up to
            key_buffer_size + (read_buffer_size + sort_buffer_size)*max_threads = 3033535 K bytes of memory
            Hope that's ok; if not, decrease some variables in the equation.
            Thread pointer: 0x7fcca4000c48
            Attempting backtrace. You can use the following information to find out
            where mysqld died. If you see no messages after this, something went
            terribly wrong...
            stack_bottom = 0x7fcdb2f13da8 thread_stack 0x49000
            /usr/sbin/mysqld(my_print_stacktrace+0x32)[0x5572b70e1fa2]
            /usr/sbin/mysqld(handle_fatal_signal+0x55d)[0x5572b6b78cbd]
            /lib/x86_64-linux-gnu/libpthread.so.0(+0x153c0)[0x7fd12343e3c0]
            /lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7fd122b2d18b]
            /lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7fd122b0c859]
            /usr/sbin/mysqld(+0x599aaa)[0x5572b6858aaa]
            /usr/sbin/mysqld(+0x58e7bc)[0x5572b684d7bc]
            /usr/sbin/mysqld(+0xb72357)[0x5572b6e31357]
            /usr/sbin/mysqld(+0xa8c116)[0x5572b6d4b116]
            /usr/sbin/mysqld(_ZN7handler18ha_index_next_sameEPhPKhj+0x1da)[0x5572b6b80bfa]
            /usr/sbin/mysqld(+0x6e6875)[0x5572b69a5875]
            /usr/sbin/mysqld(_Z10sub_selectP4JOINP13st_join_tableb+0x1d3)[0x5572b6997e33]
            /usr/sbin/mysqld(+0x6c9009)[0x5572b6988009]
            /usr/sbin/mysqld(_Z10sub_selectP4JOINP13st_join_tableb+0x210)[0x5572b6997e70]
            /usr/sbin/mysqld(_ZN4JOIN10exec_innerEv+0xe0e)[0x5572b69c49ce]
            /usr/sbin/mysqld(_ZN4JOIN4execEv+0x37)[0x5572b69c4c27]
            /usr/sbin/mysqld(_Z12mysql_selectP3THDP10TABLE_LISTjR4ListI4ItemEPS4_jP8st_orderS9_S7_S9_yP13select_resultP18st_select_lex_unitP13st_select_lex+0
            x136)[0x5572b69c2d76]
            /usr/sbin/mysqld(_Z13handle_selectP3THDP3LEXP13select_resultm+0x15a)[0x5572b69c375a]
            ut/ut0rbt.cc:458(rbt_eject_node(ib_rbt_node_t*, ib_rbt_node_t*) [clone .part.0])[0x5572b694fca1]
            row/row0sel.cc:2949(row_search_idx_cond_check(unsigned char*, row_prebuilt_t*, unsigned char const*, unsigned short const*) [clone .cold])[0x5572
            b695de52]
            row/row0sel.cc:5266(row_search_mvcc(unsigned char*, page_cur_mode_t, row_prebuilt_t*, unsigned long, unsigned long))[0x5572b69606e3]
            handler/ha_innodb.cc:9543(ha_innobase::general_fetch(unsigned char*, unsigned int, unsigned int))[0x5572b6961098]
            sql/handler.cc:3027(handler::ha_index_next_same(unsigned char*, unsigned char const*, unsigned int))[0x5572b696487c]
            sql/sql_select.cc:21193(join_read_next_same(READ_RECORD*))[0x5572b6964f12]
            sql/records.h:69(READ_RECORD::read_record())[0x5572b6a5544e]
            sql/sql_select.cc:19904(JOIN::exec_inner())[0x5572b6a5556f]
            sql/sql_parse.cc:6359(execute_sqlcom_select(THD*, TABLE_LIST*))[0x5572b7090146]
            /lib/x86_64-linux-gnu/libpthread.so.0(+0x9609)[0x7fd123432609]
            /lib/x86_64-linux-gnu/libc.so.6(clone+0x43)[0x7fd122c09103]
            Trying to get some variables.
            Some pointers may be invalid and cause the dump to abort.
            Query (0x7fcca4025e40): SELECT directory_prefix, s.project_id, s.project_id, s.key, s.value, s.type FROM redcap_external_modules m
              JOIN redcap_external_module_settings s ON m.external_module_id = s.external_module_id WHERE (s.key IN ('version', 'enabled'))
            Connection ID (thread ID): 3142
            Status: KILL_CONNECTION
            Optimizer switch: index_merge=on,index_merge_union=on,index_merge_sort_union=on,index_merge_intersection=on,index_merge_sort_intersection=off,eng
            ine_condition_pushdown=off,index_condition_pushdown=on,derived_merge=on,derived_with_keys=on,firstmatch=on,loosescan=on,materialization=on,in_to_
            exists=on,semijoin=on,partial_match_rowid_merge=on,partial_match_table_scan=on,subquery_cache=on,mrr=off,mrr_cost_based=off,mrr_sort_keys=off,out
            er_join_with_cache=on,semijoin_with_cache=on,join_cache_incremental=on,join_cache_hashed=on,join_cache_bka=on,optimize_join_buffer_size=on,table_
            elimination=on,extended_keys=on,exists_to_in=on,orderby_uses_equalities=on,condition_pushdown_for_derived=on,split_materialized=on,condition_push
            down_for_subquery=on,rowid_filter=on,condition_pushdown_from_having=on
            The manual page at http://dev.mysql.com/doc/mysql/en/crashing.html contains
            information that should help you find out what is causing the crash.
            Writing a core file...
            Working directory at /data/mysql/data
            Resource Limits:
            Limit Soft Limit Hard Limit Units
            Max cpu time unlimited unlimited seconds
            Max file size unlimited unlimited bytes
            Max data size unlimited unlimited bytes
            Max stack size 8388608 unlimited bytes
            Max core file size 0 unlimited bytes
            Max resident set unlimited unlimited bytes
            Max processes 62401 62401 processes
            Max open files 16364 16364 files
            Max locked memory 65536 65536 bytes
            Max address space unlimited unlimited bytes
            Max file locks unlimited unlimited locks
            Max pending signals 62401 62401 signals
            Max msgqueue size 819200 819200 bytes
            Max nice priority 0 0
            Max realtime priority 0 0
            Max realtime timeout unlimited unlimited us
            Core pattern: |/usr/share/apport/apport %p %s %c %d %P ...
            Jun 28 16:30:57 redcap-db02 systemd[1]: mariadb.service: Main process exited, code=killed, status=6/ABRT
            Jun 28 16:30:57 redcap-db02 systemd[1]: mariadb.service: Failed with result 'signal'.
            Jun 28 16:31:02 redcap-db02 systemd[1]: mariadb.service: Scheduled restart job, restart counter is at 1.
            Jun 28 16:31:02 redcap-db02 systemd[1]: Stopped MariaDB 10.4.13 database server.
            }}
            InnoDB: Assertion failure in file /home/buildbot/buildbot/build/m
            ariadb-10.4.13/storage/innobase/row/row0sel.cc line 3966

            {{
            InnoDB: We intentionally generate a memory trap.
            InnoDB: Submit a detailed bug report to https://jira.mariadb.org/
            InnoDB: If you get repeated assertion failures or crashes, even
            InnoDB: immediately after the mysqld startup, there may be
            InnoDB: corruption in the InnoDB tablespace. Please refer to
            InnoDB: https://mariadb.com/kb/en/library/innodb-recovery-modes/
            InnoDB: about forcing recovery.
            200628 16:30:52 [ERROR] mysqld got signal 6 ;
            This could be because you hit a bug. It is also possible that this binary
            or one of the libraries it was linked against is corrupt, improperly built,
            or misconfigured. This error can also be caused by malfunctioning hardware.
            To report this bug, see https://mariadb.com/kb/en/reporting-bugs
            We will try our best to scrape up some info that will hopefully help
            diagnose the problem, but since we have already crashed,
            something is definitely wrong and this may fail.
            Server version: 10.4.13-MariaDB-1:10.4.13+maria~focal-log
            key_buffer_size=536870912
            read_buffer_size=16777216
            max_used_connections=10
            max_threads=102
            thread_count=50
            It is possible that mysqld could use up to
            key_buffer_size + (read_buffer_size + sort_buffer_size)*max_threads = 3033535 K bytes of memory
            Hope that's ok; if not, decrease some variables in the equation.
            Thread pointer: 0x7fcca4000c48
            Attempting backtrace. You can use the following information to find out
            where mysqld died. If you see no messages after this, something went
            terribly wrong...
            stack_bottom = 0x7fcdb2f13da8 thread_stack 0x49000
            /usr/sbin/mysqld(my_print_stacktrace+0x32)[0x5572b70e1fa2]
            /usr/sbin/mysqld(handle_fatal_signal+0x55d)[0x5572b6b78cbd]
            /lib/x86_64-linux-gnu/libpthread.so.0(+0x153c0)[0x7fd12343e3c0]
            /lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7fd122b2d18b]
            /lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7fd122b0c859]
            /usr/sbin/mysqld(+0x599aaa)[0x5572b6858aaa]
            /usr/sbin/mysqld(+0x58e7bc)[0x5572b684d7bc]
            /usr/sbin/mysqld(+0xb72357)[0x5572b6e31357]
            /usr/sbin/mysqld(+0xa8c116)[0x5572b6d4b116]
            /usr/sbin/mysqld(_ZN7handler18ha_index_next_sameEPhPKhj+0x1da)[0x5572b6b80bfa]
            /usr/sbin/mysqld(+0x6e6875)[0x5572b69a5875]
            /usr/sbin/mysqld(_Z10sub_selectP4JOINP13st_join_tableb+0x1d3)[0x5572b6997e33]
            /usr/sbin/mysqld(+0x6c9009)[0x5572b6988009]
            /usr/sbin/mysqld(_Z10sub_selectP4JOINP13st_join_tableb+0x210)[0x5572b6997e70]
            /usr/sbin/mysqld(_ZN4JOIN10exec_innerEv+0xe0e)[0x5572b69c49ce]
            /usr/sbin/mysqld(_ZN4JOIN4execEv+0x37)[0x5572b69c4c27]
            /usr/sbin/mysqld(_Z12mysql_selectP3THDP10TABLE_LISTjR4ListI4ItemEPS4_jP8st_orderS9_S7_S9_yP13select_resultP18st_select_lex_unitP13st_select_lex+0
            x136)[0x5572b69c2d76]
            /usr/sbin/mysqld(_Z13handle_selectP3THDP3LEXP13select_resultm+0x15a)[0x5572b69c375a]
            ut/ut0rbt.cc:458(rbt_eject_node(ib_rbt_node_t*, ib_rbt_node_t*) [clone .part.0])[0x5572b694fca1]
            row/row0sel.cc:2949(row_search_idx_cond_check(unsigned char*, row_prebuilt_t*, unsigned char const*, unsigned short const*) [clone .cold])[0x5572
            b695de52]
            row/row0sel.cc:5266(row_search_mvcc(unsigned char*, page_cur_mode_t, row_prebuilt_t*, unsigned long, unsigned long))[0x5572b69606e3]
            handler/ha_innodb.cc:9543(ha_innobase::general_fetch(unsigned char*, unsigned int, unsigned int))[0x5572b6961098]
            sql/handler.cc:3027(handler::ha_index_next_same(unsigned char*, unsigned char const*, unsigned int))[0x5572b696487c]
            sql/sql_select.cc:21193(join_read_next_same(READ_RECORD*))[0x5572b6964f12]
            sql/records.h:69(READ_RECORD::read_record())[0x5572b6a5544e]
            sql/sql_select.cc:19904(JOIN::exec_inner())[0x5572b6a5556f]
            sql/sql_parse.cc:6359(execute_sqlcom_select(THD*, TABLE_LIST*))[0x5572b7090146]
            /lib/x86_64-linux-gnu/libpthread.so.0(+0x9609)[0x7fd123432609]
            /lib/x86_64-linux-gnu/libc.so.6(clone+0x43)[0x7fd122c09103]
            Trying to get some variables.
            Some pointers may be invalid and cause the dump to abort.
            Query (0x7fcca4025e40): SELECT directory_prefix, s.project_id, s.project_id, s.key, s.value, s.type FROM redcap_external_modules m
              JOIN redcap_external_module_settings s ON m.external_module_id = s.external_module_id WHERE (s.key IN ('version', 'enabled'))
            Connection ID (thread ID): 3142
            Status: KILL_CONNECTION
            Optimizer switch: index_merge=on,index_merge_union=on,index_merge_sort_union=on,index_merge_intersection=on,index_merge_sort_intersection=off,eng
            ine_condition_pushdown=off,index_condition_pushdown=on,derived_merge=on,derived_with_keys=on,firstmatch=on,loosescan=on,materialization=on,in_to_
            exists=on,semijoin=on,partial_match_rowid_merge=on,partial_match_table_scan=on,subquery_cache=on,mrr=off,mrr_cost_based=off,mrr_sort_keys=off,out
            er_join_with_cache=on,semijoin_with_cache=on,join_cache_incremental=on,join_cache_hashed=on,join_cache_bka=on,optimize_join_buffer_size=on,table_
            elimination=on,extended_keys=on,exists_to_in=on,orderby_uses_equalities=on,condition_pushdown_for_derived=on,split_materialized=on,condition_push
            down_for_subquery=on,rowid_filter=on,condition_pushdown_from_having=on
            The manual page at http://dev.mysql.com/doc/mysql/en/crashing.html contains
            information that should help you find out what is causing the crash.
            Writing a core file...
            Working directory at /data/mysql/data
            Resource Limits:
            Limit Soft Limit Hard Limit Units
            Max cpu time unlimited unlimited seconds
            Max file size unlimited unlimited bytes
            Max data size unlimited unlimited bytes
            Max stack size 8388608 unlimited bytes
            Max core file size 0 unlimited bytes
            Max resident set unlimited unlimited bytes
            Max processes 62401 62401 processes
            Max open files 16364 16364 files
            Max locked memory 65536 65536 bytes
            Max address space unlimited unlimited bytes
            Max file locks unlimited unlimited locks
            Max pending signals 62401 62401 signals
            Max msgqueue size 819200 819200 bytes
            Max nice priority 0 0
            Max realtime priority 0 0
            Max realtime timeout unlimited unlimited us
            Core pattern: |/usr/share/apport/apport %p %s %c %d %P ...
            Jun 28 16:30:57 redcap-db02 systemd[1]: mariadb.service: Main process exited, code=killed, status=6/ABRT
            Jun 28 16:30:57 redcap-db02 systemd[1]: mariadb.service: Failed with result 'signal'.
            Jun 28 16:31:02 redcap-db02 systemd[1]: mariadb.service: Scheduled restart job, restart counter is at 1.
            Jun 28 16:31:02 redcap-db02 systemd[1]: Stopped MariaDB 10.4.13 database server.
            }}
            elenst Elena Stepanova made changes -
            Description InnoDB: Assertion failure in file /home/buildbot/buildbot/build/m
            ariadb-10.4.13/storage/innobase/row/row0sel.cc line 3966

            {{
            InnoDB: We intentionally generate a memory trap.
            InnoDB: Submit a detailed bug report to https://jira.mariadb.org/
            InnoDB: If you get repeated assertion failures or crashes, even
            InnoDB: immediately after the mysqld startup, there may be
            InnoDB: corruption in the InnoDB tablespace. Please refer to
            InnoDB: https://mariadb.com/kb/en/library/innodb-recovery-modes/
            InnoDB: about forcing recovery.
            200628 16:30:52 [ERROR] mysqld got signal 6 ;
            This could be because you hit a bug. It is also possible that this binary
            or one of the libraries it was linked against is corrupt, improperly built,
            or misconfigured. This error can also be caused by malfunctioning hardware.
            To report this bug, see https://mariadb.com/kb/en/reporting-bugs
            We will try our best to scrape up some info that will hopefully help
            diagnose the problem, but since we have already crashed,
            something is definitely wrong and this may fail.
            Server version: 10.4.13-MariaDB-1:10.4.13+maria~focal-log
            key_buffer_size=536870912
            read_buffer_size=16777216
            max_used_connections=10
            max_threads=102
            thread_count=50
            It is possible that mysqld could use up to
            key_buffer_size + (read_buffer_size + sort_buffer_size)*max_threads = 3033535 K bytes of memory
            Hope that's ok; if not, decrease some variables in the equation.
            Thread pointer: 0x7fcca4000c48
            Attempting backtrace. You can use the following information to find out
            where mysqld died. If you see no messages after this, something went
            terribly wrong...
            stack_bottom = 0x7fcdb2f13da8 thread_stack 0x49000
            /usr/sbin/mysqld(my_print_stacktrace+0x32)[0x5572b70e1fa2]
            /usr/sbin/mysqld(handle_fatal_signal+0x55d)[0x5572b6b78cbd]
            /lib/x86_64-linux-gnu/libpthread.so.0(+0x153c0)[0x7fd12343e3c0]
            /lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7fd122b2d18b]
            /lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7fd122b0c859]
            /usr/sbin/mysqld(+0x599aaa)[0x5572b6858aaa]
            /usr/sbin/mysqld(+0x58e7bc)[0x5572b684d7bc]
            /usr/sbin/mysqld(+0xb72357)[0x5572b6e31357]
            /usr/sbin/mysqld(+0xa8c116)[0x5572b6d4b116]
            /usr/sbin/mysqld(_ZN7handler18ha_index_next_sameEPhPKhj+0x1da)[0x5572b6b80bfa]
            /usr/sbin/mysqld(+0x6e6875)[0x5572b69a5875]
            /usr/sbin/mysqld(_Z10sub_selectP4JOINP13st_join_tableb+0x1d3)[0x5572b6997e33]
            /usr/sbin/mysqld(+0x6c9009)[0x5572b6988009]
            /usr/sbin/mysqld(_Z10sub_selectP4JOINP13st_join_tableb+0x210)[0x5572b6997e70]
            /usr/sbin/mysqld(_ZN4JOIN10exec_innerEv+0xe0e)[0x5572b69c49ce]
            /usr/sbin/mysqld(_ZN4JOIN4execEv+0x37)[0x5572b69c4c27]
            /usr/sbin/mysqld(_Z12mysql_selectP3THDP10TABLE_LISTjR4ListI4ItemEPS4_jP8st_orderS9_S7_S9_yP13select_resultP18st_select_lex_unitP13st_select_lex+0
            x136)[0x5572b69c2d76]
            /usr/sbin/mysqld(_Z13handle_selectP3THDP3LEXP13select_resultm+0x15a)[0x5572b69c375a]
            ut/ut0rbt.cc:458(rbt_eject_node(ib_rbt_node_t*, ib_rbt_node_t*) [clone .part.0])[0x5572b694fca1]
            row/row0sel.cc:2949(row_search_idx_cond_check(unsigned char*, row_prebuilt_t*, unsigned char const*, unsigned short const*) [clone .cold])[0x5572
            b695de52]
            row/row0sel.cc:5266(row_search_mvcc(unsigned char*, page_cur_mode_t, row_prebuilt_t*, unsigned long, unsigned long))[0x5572b69606e3]
            handler/ha_innodb.cc:9543(ha_innobase::general_fetch(unsigned char*, unsigned int, unsigned int))[0x5572b6961098]
            sql/handler.cc:3027(handler::ha_index_next_same(unsigned char*, unsigned char const*, unsigned int))[0x5572b696487c]
            sql/sql_select.cc:21193(join_read_next_same(READ_RECORD*))[0x5572b6964f12]
            sql/records.h:69(READ_RECORD::read_record())[0x5572b6a5544e]
            sql/sql_select.cc:19904(JOIN::exec_inner())[0x5572b6a5556f]
            sql/sql_parse.cc:6359(execute_sqlcom_select(THD*, TABLE_LIST*))[0x5572b7090146]
            /lib/x86_64-linux-gnu/libpthread.so.0(+0x9609)[0x7fd123432609]
            /lib/x86_64-linux-gnu/libc.so.6(clone+0x43)[0x7fd122c09103]
            Trying to get some variables.
            Some pointers may be invalid and cause the dump to abort.
            Query (0x7fcca4025e40): SELECT directory_prefix, s.project_id, s.project_id, s.key, s.value, s.type FROM redcap_external_modules m
              JOIN redcap_external_module_settings s ON m.external_module_id = s.external_module_id WHERE (s.key IN ('version', 'enabled'))
            Connection ID (thread ID): 3142
            Status: KILL_CONNECTION
            Optimizer switch: index_merge=on,index_merge_union=on,index_merge_sort_union=on,index_merge_intersection=on,index_merge_sort_intersection=off,eng
            ine_condition_pushdown=off,index_condition_pushdown=on,derived_merge=on,derived_with_keys=on,firstmatch=on,loosescan=on,materialization=on,in_to_
            exists=on,semijoin=on,partial_match_rowid_merge=on,partial_match_table_scan=on,subquery_cache=on,mrr=off,mrr_cost_based=off,mrr_sort_keys=off,out
            er_join_with_cache=on,semijoin_with_cache=on,join_cache_incremental=on,join_cache_hashed=on,join_cache_bka=on,optimize_join_buffer_size=on,table_
            elimination=on,extended_keys=on,exists_to_in=on,orderby_uses_equalities=on,condition_pushdown_for_derived=on,split_materialized=on,condition_push
            down_for_subquery=on,rowid_filter=on,condition_pushdown_from_having=on
            The manual page at http://dev.mysql.com/doc/mysql/en/crashing.html contains
            information that should help you find out what is causing the crash.
            Writing a core file...
            Working directory at /data/mysql/data
            Resource Limits:
            Limit Soft Limit Hard Limit Units
            Max cpu time unlimited unlimited seconds
            Max file size unlimited unlimited bytes
            Max data size unlimited unlimited bytes
            Max stack size 8388608 unlimited bytes
            Max core file size 0 unlimited bytes
            Max resident set unlimited unlimited bytes
            Max processes 62401 62401 processes
            Max open files 16364 16364 files
            Max locked memory 65536 65536 bytes
            Max address space unlimited unlimited bytes
            Max file locks unlimited unlimited locks
            Max pending signals 62401 62401 signals
            Max msgqueue size 819200 819200 bytes
            Max nice priority 0 0
            Max realtime priority 0 0
            Max realtime timeout unlimited unlimited us
            Core pattern: |/usr/share/apport/apport %p %s %c %d %P ...
            Jun 28 16:30:57 redcap-db02 systemd[1]: mariadb.service: Main process exited, code=killed, status=6/ABRT
            Jun 28 16:30:57 redcap-db02 systemd[1]: mariadb.service: Failed with result 'signal'.
            Jun 28 16:31:02 redcap-db02 systemd[1]: mariadb.service: Scheduled restart job, restart counter is at 1.
            Jun 28 16:31:02 redcap-db02 systemd[1]: Stopped MariaDB 10.4.13 database server.
            }}
            {noformat}
            InnoDB: Assertion failure in file /home/buildbot/buildbot/build/m
            ariadb-10.4.13/storage/innobase/row/row0sel.cc line 3966

            InnoDB: We intentionally generate a memory trap.
            InnoDB: Submit a detailed bug report to https://jira.mariadb.org/
            InnoDB: If you get repeated assertion failures or crashes, even
            InnoDB: immediately after the mysqld startup, there may be
            InnoDB: corruption in the InnoDB tablespace. Please refer to
            InnoDB: https://mariadb.com/kb/en/library/innodb-recovery-modes/
            InnoDB: about forcing recovery.
            200628 16:30:52 [ERROR] mysqld got signal 6 ;
            This could be because you hit a bug. It is also possible that this binary
            or one of the libraries it was linked against is corrupt, improperly built,
            or misconfigured. This error can also be caused by malfunctioning hardware.
            To report this bug, see https://mariadb.com/kb/en/reporting-bugs
            We will try our best to scrape up some info that will hopefully help
            diagnose the problem, but since we have already crashed,
            something is definitely wrong and this may fail.
            Server version: 10.4.13-MariaDB-1:10.4.13+maria~focal-log
            key_buffer_size=536870912
            read_buffer_size=16777216
            max_used_connections=10
            max_threads=102
            thread_count=50
            It is possible that mysqld could use up to
            key_buffer_size + (read_buffer_size + sort_buffer_size)*max_threads = 3033535 K bytes of memory
            Hope that's ok; if not, decrease some variables in the equation.
            Thread pointer: 0x7fcca4000c48
            Attempting backtrace. You can use the following information to find out
            where mysqld died. If you see no messages after this, something went
            terribly wrong...
            stack_bottom = 0x7fcdb2f13da8 thread_stack 0x49000
            /usr/sbin/mysqld(my_print_stacktrace+0x32)[0x5572b70e1fa2]
            /usr/sbin/mysqld(handle_fatal_signal+0x55d)[0x5572b6b78cbd]
            /lib/x86_64-linux-gnu/libpthread.so.0(+0x153c0)[0x7fd12343e3c0]
            /lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7fd122b2d18b]
            /lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7fd122b0c859]
            /usr/sbin/mysqld(+0x599aaa)[0x5572b6858aaa]
            /usr/sbin/mysqld(+0x58e7bc)[0x5572b684d7bc]
            /usr/sbin/mysqld(+0xb72357)[0x5572b6e31357]
            /usr/sbin/mysqld(+0xa8c116)[0x5572b6d4b116]
            /usr/sbin/mysqld(_ZN7handler18ha_index_next_sameEPhPKhj+0x1da)[0x5572b6b80bfa]
            /usr/sbin/mysqld(+0x6e6875)[0x5572b69a5875]
            /usr/sbin/mysqld(_Z10sub_selectP4JOINP13st_join_tableb+0x1d3)[0x5572b6997e33]
            /usr/sbin/mysqld(+0x6c9009)[0x5572b6988009]
            /usr/sbin/mysqld(_Z10sub_selectP4JOINP13st_join_tableb+0x210)[0x5572b6997e70]
            /usr/sbin/mysqld(_ZN4JOIN10exec_innerEv+0xe0e)[0x5572b69c49ce]
            /usr/sbin/mysqld(_ZN4JOIN4execEv+0x37)[0x5572b69c4c27]
            /usr/sbin/mysqld(_Z12mysql_selectP3THDP10TABLE_LISTjR4ListI4ItemEPS4_jP8st_orderS9_S7_S9_yP13select_resultP18st_select_lex_unitP13st_select_lex+0
            x136)[0x5572b69c2d76]
            /usr/sbin/mysqld(_Z13handle_selectP3THDP3LEXP13select_resultm+0x15a)[0x5572b69c375a]
            ut/ut0rbt.cc:458(rbt_eject_node(ib_rbt_node_t*, ib_rbt_node_t*) [clone .part.0])[0x5572b694fca1]
            row/row0sel.cc:2949(row_search_idx_cond_check(unsigned char*, row_prebuilt_t*, unsigned char const*, unsigned short const*) [clone .cold])[0x5572
            b695de52]
            row/row0sel.cc:5266(row_search_mvcc(unsigned char*, page_cur_mode_t, row_prebuilt_t*, unsigned long, unsigned long))[0x5572b69606e3]
            handler/ha_innodb.cc:9543(ha_innobase::general_fetch(unsigned char*, unsigned int, unsigned int))[0x5572b6961098]
            sql/handler.cc:3027(handler::ha_index_next_same(unsigned char*, unsigned char const*, unsigned int))[0x5572b696487c]
            sql/sql_select.cc:21193(join_read_next_same(READ_RECORD*))[0x5572b6964f12]
            sql/records.h:69(READ_RECORD::read_record())[0x5572b6a5544e]
            sql/sql_select.cc:19904(JOIN::exec_inner())[0x5572b6a5556f]
            sql/sql_parse.cc:6359(execute_sqlcom_select(THD*, TABLE_LIST*))[0x5572b7090146]
            /lib/x86_64-linux-gnu/libpthread.so.0(+0x9609)[0x7fd123432609]
            /lib/x86_64-linux-gnu/libc.so.6(clone+0x43)[0x7fd122c09103]
            Trying to get some variables.
            Some pointers may be invalid and cause the dump to abort.
            Query (0x7fcca4025e40): SELECT directory_prefix, s.project_id, s.project_id, s.key, s.value, s.type FROM redcap_external_modules m
              JOIN redcap_external_module_settings s ON m.external_module_id = s.external_module_id WHERE (s.key IN ('version', 'enabled'))
            Connection ID (thread ID): 3142
            Status: KILL_CONNECTION
            Optimizer switch: index_merge=on,index_merge_union=on,index_merge_sort_union=on,index_merge_intersection=on,index_merge_sort_intersection=off,eng
            ine_condition_pushdown=off,index_condition_pushdown=on,derived_merge=on,derived_with_keys=on,firstmatch=on,loosescan=on,materialization=on,in_to_
            exists=on,semijoin=on,partial_match_rowid_merge=on,partial_match_table_scan=on,subquery_cache=on,mrr=off,mrr_cost_based=off,mrr_sort_keys=off,out
            er_join_with_cache=on,semijoin_with_cache=on,join_cache_incremental=on,join_cache_hashed=on,join_cache_bka=on,optimize_join_buffer_size=on,table_
            elimination=on,extended_keys=on,exists_to_in=on,orderby_uses_equalities=on,condition_pushdown_for_derived=on,split_materialized=on,condition_push
            down_for_subquery=on,rowid_filter=on,condition_pushdown_from_having=on
            The manual page at http://dev.mysql.com/doc/mysql/en/crashing.html contains
            information that should help you find out what is causing the crash.
            Writing a core file...
            Working directory at /data/mysql/data
            Resource Limits:
            Limit Soft Limit Hard Limit Units
            Max cpu time unlimited unlimited seconds
            Max file size unlimited unlimited bytes
            Max data size unlimited unlimited bytes
            Max stack size 8388608 unlimited bytes
            Max core file size 0 unlimited bytes
            Max resident set unlimited unlimited bytes
            Max processes 62401 62401 processes
            Max open files 16364 16364 files
            Max locked memory 65536 65536 bytes
            Max address space unlimited unlimited bytes
            Max file locks unlimited unlimited locks
            Max pending signals 62401 62401 signals
            Max msgqueue size 819200 819200 bytes
            Max nice priority 0 0
            Max realtime priority 0 0
            Max realtime timeout unlimited unlimited us
            Core pattern: |/usr/share/apport/apport %p %s %c %d %P ...
            Jun 28 16:30:57 redcap-db02 systemd[1]: mariadb.service: Main process exited, code=killed, status=6/ABRT
            Jun 28 16:30:57 redcap-db02 systemd[1]: mariadb.service: Failed with result 'signal'.
            Jun 28 16:31:02 redcap-db02 systemd[1]: mariadb.service: Scheduled restart job, restart counter is at 1.
            Jun 28 16:31:02 redcap-db02 systemd[1]: Stopped MariaDB 10.4.13 database server.
            {noformat}
            elenst Elena Stepanova made changes -
            Component/s Storage Engine - InnoDB [ 10129 ]
            Fix Version/s 10.4 [ 22408 ]
            Assignee Marko Mäkelä [ marko ]
            marko Marko Mäkelä made changes -
            marko Marko Mäkelä made changes -
            Component/s Optimizer [ 10200 ]
            Assignee Marko Mäkelä [ marko ] Sergei Petrunia [ psergey ]
            Labels need_feedback
            elenst Elena Stepanova made changes -
            Fix Version/s N/A [ 14700 ]
            Fix Version/s 10.4 [ 22408 ]
            Resolution Incomplete [ 4 ]
            Status Open [ 1 ] Closed [ 6 ]
            serg Sergei Golubchik made changes -
            Workflow MariaDB v3 [ 110586 ] MariaDB v4 [ 158033 ]

            People

              psergei Sergei Petrunia
              Joseph.Nahmias@mountsinai.org Joseph Nahmias
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              0 Vote for this issue
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              Dates

                Created:
                Updated:
                Resolved:

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