Details

    • Bug
    • Status: Closed (View Workflow)
    • Major
    • Resolution: Duplicate
    • 10.1.16
    • 10.1.17
    • Galera
    • Ubuntu 16.04

    Description

      One of cluster nodes crashed and was unable to join the group with the following message:

      2016-08-01 19:50:19 140521508780288 [Note] WSREP: Read nil XID from storage engines, skipping position init
      2016-08-01 19:50:19 140521508780288 [Note] WSREP: wsrep_load(): loading provider library 'none'
      2016-08-01 19:50:19 140521508780288 [Note] Using unique option prefix 'myisam-recover' is error-prone and can break in the future. Please use the full name 'myisam-recover-options' instead.
      2016-08-01 19:50:19 140521508780288 [Note] InnoDB: Using mutexes to ref count buffer pool pages
      2016-08-01 19:50:19 140521508780288 [Note] InnoDB: The InnoDB memory heap is disabled
      2016-08-01 19:50:19 140521508780288 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins
      2016-08-01 19:50:19 140521508780288 [Note] InnoDB: Memory barrier is not used
      2016-08-01 19:50:19 140521508780288 [Note] InnoDB: Compressed tables use zlib 1.2.8
      2016-08-01 19:50:19 140521508780288 [Note] InnoDB: Using Linux native AIO
      2016-08-01 19:50:19 140521508780288 [Note] InnoDB: Using SSE crc32 instructions
      2016-08-01 19:50:19 140521508780288 [Note] InnoDB: Initializing buffer pool, size = 54.0G
      2016-08-01 19:50:24 140521508780288 [Note] InnoDB: Completed initialization of buffer pool
      2016-08-01 19:50:26 140521508780288 [Note] InnoDB: Highest supported file format is Barracuda.
      2016-08-01 19:50:27 140521508780288 [Note] InnoDB: 128 rollback segment(s) are active.
      2016-08-01 19:50:27 140521508780288 [Note] InnoDB: Waiting for purge to start
      2016-08-01 19:50:28 140521508780288 [Note] InnoDB:  Percona XtraDB (http://www.percona.com) 5.6.30-76.3 started; log sequence number 5155418059026
      2016-08-01 19:50:28 140457849882368 [Note] InnoDB: Dumping buffer pool(s) not yet started
      2016-08-01 19:50:28 140521508780288 [Note] Plugin 'FEEDBACK' is disabled.
      2016-08-01 19:50:32 140111175645440 [Note] Using unique option prefix 'myisam-recover' is error-prone and can break in the future. Please use the full name 'myisam-recover-options' instead.
      2016-08-01 19:50:32 140111175645440 [Note] InnoDB: Using mutexes to ref count buffer pool pages
      2016-08-01 19:50:32 140111175645440 [Note] InnoDB: The InnoDB memory heap is disabled
      2016-08-01 19:50:32 140111175645440 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins
      2016-08-01 19:50:32 140111175645440 [Note] InnoDB: Memory barrier is not used
      2016-08-01 19:50:32 140111175645440 [Note] InnoDB: Compressed tables use zlib 1.2.8
      2016-08-01 19:50:32 140111175645440 [Note] InnoDB: Using Linux native AIO
      2016-08-01 19:50:32 140111175645440 [Note] InnoDB: Using SSE crc32 instructions
      2016-08-01 19:50:32 140111175645440 [Note] InnoDB: Initializing buffer pool, size = 54.0G
      2016-08-01 19:50:37 140111175645440 [Note] InnoDB: Completed initialization of buffer pool
      2016-08-01 19:50:39 140111175645440 [Note] InnoDB: Highest supported file format is Barracuda.
      2016-08-01 19:50:40 140111175645440 [Note] InnoDB: 128 rollback segment(s) are active.
      2016-08-01 19:50:40 140111175645440 [Note] InnoDB: Waiting for purge to start
      2016-08-01 19:50:40 140111175645440 [Note] InnoDB:  Percona XtraDB (http://www.percona.com) 5.6.30-76.3 started; log sequence number 5155418059036
      2016-08-01 19:50:40 140111175645440 [Warning] InnoDB: Skipping buffer pool dump/restore during wsrep recovery.
      2016-08-01 19:50:40 140111175645440 [Note] Plugin 'FEEDBACK' is disabled.
      2016-08-01 19:50:40 140111175645440 [Note] Recovering after a crash using /var/lib/mysql/mysql-bin
      2016-08-01 19:50:40 140111175645440 [ERROR] Binlog file '/var/lib/mysql/mysql-bin.000025' not found in binlog index, needed for recovery. Aborting.
      2016-08-01 19:50:40 140111175645440 [ERROR] Crash recovery failed. Either correct the problem (if it's, for example, out of memory error) and restart, or delete (or rename) binary log and start mysqld with --tc-heuristic-recover={commit$
      2016-08-01 19:50:40 140111175645440 [ERROR] Can't init tc log
      2016-08-01 19:50:40 140111175645440 [ERROR] Aborting
      

      Removing /var/lib/mysql for a full resync did not do a trick. I also noticed that db2 (the donor) had mysql-bin logs numbered 0025-0038, however during the SST only the last log file has been transferred.

      Next step was to reinitiate the cluster, however a working node db2 did not start up again after a restart:

      Aug  1 21:18:24 db2 systemd[1]: Starting MariaDB database server...
      Aug  1 21:18:32 db2 mysqld[17595]: WSREP: Failed to recover position: '2016-08-01 21:18:25 139645985028352 [Note] /usr/sbin/mysqld (mysqld 10.1.16-MariaDB-1~xenial) starting as process 17759 ...'
      Aug  1 21:18:32 db2 systemd[1]: mariadb.service: Control process exited, code=exited status=1
      Aug  1 21:18:32 db2 systemd[1]: Failed to start MariaDB database server.
      Aug  1 21:18:32 db2 systemd[1]: mariadb.service: Unit entered failed state.
      Aug  1 21:18:32 db2 systemd[1]: mariadb.service: Failed with result 'exit-code'.
      

      Same message is shown if I bootstrap db1, even with backups taken 2 months ago (using xtrabackup).

      When I disable wsrep_on=off, the database starts up correctly.

      MariaDB 10.1.16
      xtrabackup 2.3.5
      galera-3 25.3.15

      Attachments

        Issue Links

          Activity

            mtxd Artur Čuvašov added a comment - - edited

            I tried to initiate a clean database with mysql_install_db. The server started up just fine with wsrep=off, however when I turn it "ON" I get the following in mysql-error.log:

            2016-08-03 13:25:16 140330179614976 [Note] Using unique option prefix 'myisam-recover' is error-prone and can break in the future. Please use the full name 'myisam-recover-options' instead.
            2016-08-03 13:25:17 140330179614976 [Note] InnoDB: Using mutexes to ref count buffer pool pages
            2016-08-03 13:25:17 140330179614976 [Note] InnoDB: The InnoDB memory heap is disabled
            2016-08-03 13:25:17 140330179614976 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins
            2016-08-03 13:25:17 140330179614976 [Note] InnoDB: Memory barrier is not used
            2016-08-03 13:25:17 140330179614976 [Note] InnoDB: Compressed tables use zlib 1.2.8
            2016-08-03 13:25:17 140330179614976 [Note] InnoDB: Using Linux native AIO
            2016-08-03 13:25:17 140330179614976 [Note] InnoDB: Using SSE crc32 instructions
            2016-08-03 13:25:17 140330179614976 [Note] InnoDB: Initializing buffer pool, size = 54.0G
            2016-08-03 13:25:17 140330179614976 [Note] InnoDB: Completed initialization of buffer pool
            2016-08-03 13:25:17 140330179614976 [Note] InnoDB: Highest supported file format is Barracuda.
            2016-08-03 13:25:18 140330179614976 [Note] InnoDB: 128 rollback segment(s) are active.
            2016-08-03 13:25:18 140330179614976 [Note] InnoDB: Waiting for purge to start
            2016-08-03 13:25:18 140330179614976 [Note] InnoDB:  Percona XtraDB (http://www.percona.com) 5.6.30-76.3 started; log sequence number 1617053
            2016-08-03 13:25:18 140330179614976 [Warning] InnoDB: Skipping buffer pool dump/restore during wsrep recovery.
            2016-08-03 13:25:18 140330179614976 [Note] Plugin 'FEEDBACK' is disabled.
            2016-08-03 13:25:18 140330179614976 [Note] Server socket created on IP: '0.0.0.0'.
            2016-08-03 13:25:18 140330179614976 [Note] WSREP: Recovered position: 00000000-0000-0000-0000-000000000000:-1
            

            and this in syslog:

            Aug  3 13:25:16 db1 systemd[1]: Starting MariaDB database server...
            Aug  3 13:25:20 db1 mysqld[571]: WSREP: Failed to recover position: '2016-08-03 13:25:16 140330179614976 [Note] /usr/sbin/mysqld (mysqld 10.1.16-MariaDB-1~xenial) starting as process 755 ...'
            Aug  3 13:25:20 db1 systemd[1]: mariadb.service: Control process exited, code=exited status=1
            Aug  3 13:25:20 db1 systemd[1]: Failed to start MariaDB database server.
            Aug  3 13:25:20 db1 systemd[1]: mariadb.service: Unit entered failed state.
            Aug  3 13:25:20 db1 systemd[1]: mariadb.service: Failed with result 'exit-code'.
            

            my.cnf:

            [mysql]
             
            # CLIENT #
            #port                           = 3306
            socket                         = /var/lib/mysql/mysql.sock
             
            [galera]
             
            # GALERA #
            wsrep_on=ON
             
            binlog_format=ROW
            default-storage-engine=innodb
            innodb_autoinc_lock_mode=2
            bind-address=0.0.0.0
            wsrep_log_conflicts=1
             
            ## Galera Provider Configuration
            wsrep_provider=/usr/lib/galera/libgalera_smm.so
            wsrep_provider_options="cert.log_conflicts=1; gcache.size=32G"
             
            ## Galera Cluster Configuration
            wsrep_cluster_name="galera"
            wsrep_cluster_address="gcomm://"
            #wsrep_cluster_address="gcomm://1.2.3.4,1.2.3.5"
            #wsrep_cluster_address="gcomm://db1:3307,db2:3307"
             
            ## Galera Synchronization Congifuration
            wsrep_sst_method=rsync
            #wsrep_sst_auth=user:pass
             
            ## Galera Node Configuration
            wsrep_node_address="1.2.3.4"
            wsrep_node_name="db1"
             
            [mysqld]
             
            port                            = 3306
             
            # GENERAL #
            user                           = mysql
            default-storage-engine         = InnoDB
            socket                         = /var/lib/mysql/mysql.sock
            pid-file                       = /var/lib/mysql/mysql.pid
             
            # MyISAM #
            key-buffer-size                = 32M
            myisam-recover                 = FORCE,BACKUP
             
            # SAFETY #
            max-allowed-packet             = 16M
            max-connect-errors             = 1000000
            skip-name-resolve
            #STRICT_TRANS_TABLES
            sql-mode                       = ERROR_FOR_DIVISION_BY_ZERO,NO_AUTO_CREATE_USER,NO_AUTO_VALUE_ON_ZERO,NO_ENGINE_SUBSTITUTION,NO_ZERO_DATE,NO_ZERO_IN_DATE,ONLY_FULL_GROUP_BY
            sysdate-is-now                 = 1
            innodb                         = FORCE
            innodb-strict-mode             = 1
             
            # DATA STORAGE #
            datadir                        = /var/lib/mysql/
             
            # BINARY LOGGING #
            log-bin                        = /var/lib/mysql/mysql-bin
            expire-logs-days               = 14
            sync-binlog                    = 1
             
            # CACHES AND LIMITS #
            tmp-table-size                 = 32M
            max-heap-table-size            = 32M
            query-cache-type               = 0
            query-cache-size               = 0
            max-connections                = 500
            thread-cache-size              = 50
            open-files-limit               = 65535
            table-definition-cache         = 4096
            table-open-cache               = 4096
             
            # INNODB #
            innodb-flush-method            = O_DIRECT
            innodb-log-files-in-group      = 2
            innodb-log-file-size           = 512M
            innodb-flush-log-at-trx-commit = 0
            innodb-file-per-table          = 1
            innodb-buffer-pool-size        = 54G
             
            # LOGGING #
            log-error                      = /var/log/mysql/mysql-error.log
            log-queries-not-using-indexes  = 1
            slow-query-log                 = 1
            slow-query-log-file            = /var/log/mysql/mysql-slow.log
            general_log                    = 1
            general_log_file               = /var/log/mysql/mysql-general.log
            

            mtxd Artur ÄŒuvaÅ¡ov added a comment - - edited I tried to initiate a clean database with mysql_install_db. The server started up just fine with wsrep=off, however when I turn it "ON" I get the following in mysql-error.log: 2016-08-03 13:25:16 140330179614976 [Note] Using unique option prefix 'myisam-recover' is error-prone and can break in the future. Please use the full name 'myisam-recover-options' instead. 2016-08-03 13:25:17 140330179614976 [Note] InnoDB: Using mutexes to ref count buffer pool pages 2016-08-03 13:25:17 140330179614976 [Note] InnoDB: The InnoDB memory heap is disabled 2016-08-03 13:25:17 140330179614976 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins 2016-08-03 13:25:17 140330179614976 [Note] InnoDB: Memory barrier is not used 2016-08-03 13:25:17 140330179614976 [Note] InnoDB: Compressed tables use zlib 1.2.8 2016-08-03 13:25:17 140330179614976 [Note] InnoDB: Using Linux native AIO 2016-08-03 13:25:17 140330179614976 [Note] InnoDB: Using SSE crc32 instructions 2016-08-03 13:25:17 140330179614976 [Note] InnoDB: Initializing buffer pool, size = 54.0G 2016-08-03 13:25:17 140330179614976 [Note] InnoDB: Completed initialization of buffer pool 2016-08-03 13:25:17 140330179614976 [Note] InnoDB: Highest supported file format is Barracuda. 2016-08-03 13:25:18 140330179614976 [Note] InnoDB: 128 rollback segment(s) are active. 2016-08-03 13:25:18 140330179614976 [Note] InnoDB: Waiting for purge to start 2016-08-03 13:25:18 140330179614976 [Note] InnoDB: Percona XtraDB (http://www.percona.com) 5.6.30-76.3 started; log sequence number 1617053 2016-08-03 13:25:18 140330179614976 [Warning] InnoDB: Skipping buffer pool dump/restore during wsrep recovery. 2016-08-03 13:25:18 140330179614976 [Note] Plugin 'FEEDBACK' is disabled. 2016-08-03 13:25:18 140330179614976 [Note] Server socket created on IP: '0.0.0.0'. 2016-08-03 13:25:18 140330179614976 [Note] WSREP: Recovered position: 00000000-0000-0000-0000-000000000000:-1 and this in syslog: Aug 3 13:25:16 db1 systemd[1]: Starting MariaDB database server... Aug 3 13:25:20 db1 mysqld[571]: WSREP: Failed to recover position: '2016-08-03 13:25:16 140330179614976 [Note] /usr/sbin/mysqld (mysqld 10.1.16-MariaDB-1~xenial) starting as process 755 ...' Aug 3 13:25:20 db1 systemd[1]: mariadb.service: Control process exited, code=exited status=1 Aug 3 13:25:20 db1 systemd[1]: Failed to start MariaDB database server. Aug 3 13:25:20 db1 systemd[1]: mariadb.service: Unit entered failed state. Aug 3 13:25:20 db1 systemd[1]: mariadb.service: Failed with result 'exit-code'. my.cnf: [mysql]   # CLIENT # #port = 3306 socket = /var/lib/mysql/mysql.sock   [galera]   # GALERA # wsrep_on=ON   binlog_format=ROW default-storage-engine=innodb innodb_autoinc_lock_mode=2 bind-address=0.0.0.0 wsrep_log_conflicts=1   ## Galera Provider Configuration wsrep_provider=/usr/lib/galera/libgalera_smm.so wsrep_provider_options="cert.log_conflicts=1; gcache.size=32G"   ## Galera Cluster Configuration wsrep_cluster_name="galera" wsrep_cluster_address="gcomm://" #wsrep_cluster_address="gcomm://1.2.3.4,1.2.3.5" #wsrep_cluster_address="gcomm://db1:3307,db2:3307"   ## Galera Synchronization Congifuration wsrep_sst_method=rsync #wsrep_sst_auth=user:pass   ## Galera Node Configuration wsrep_node_address="1.2.3.4" wsrep_node_name="db1"   [mysqld]   port = 3306   # GENERAL # user = mysql default-storage-engine = InnoDB socket = /var/lib/mysql/mysql.sock pid-file = /var/lib/mysql/mysql.pid   # MyISAM # key-buffer-size = 32M myisam-recover = FORCE,BACKUP   # SAFETY # max-allowed-packet = 16M max-connect-errors = 1000000 skip-name-resolve #STRICT_TRANS_TABLES sql-mode = ERROR_FOR_DIVISION_BY_ZERO,NO_AUTO_CREATE_USER,NO_AUTO_VALUE_ON_ZERO,NO_ENGINE_SUBSTITUTION,NO_ZERO_DATE,NO_ZERO_IN_DATE,ONLY_FULL_GROUP_BY sysdate-is-now = 1 innodb = FORCE innodb-strict-mode = 1   # DATA STORAGE # datadir = /var/lib/mysql/   # BINARY LOGGING # log-bin = /var/lib/mysql/mysql-bin expire-logs-days = 14 sync-binlog = 1   # CACHES AND LIMITS # tmp-table-size = 32M max-heap-table-size = 32M query-cache-type = 0 query-cache-size = 0 max-connections = 500 thread-cache-size = 50 open-files-limit = 65535 table-definition-cache = 4096 table-open-cache = 4096   # INNODB # innodb-flush-method = O_DIRECT innodb-log-files-in-group = 2 innodb-log-file-size = 512M innodb-flush-log-at-trx-commit = 0 innodb-file-per-table = 1 innodb-buffer-pool-size = 54G   # LOGGING # log-error = /var/log/mysql/mysql-error.log log-queries-not-using-indexes = 1 slow-query-log = 1 slow-query-log-file = /var/log/mysql/mysql-slow.log general_log = 1 general_log_file = /var/log/mysql/mysql-general.log

            People

              nirbhay_c Nirbhay Choubey (Inactive)
              mtxd Artur Čuvašov
              Votes:
              0 Vote for this issue
              Watchers:
              1 Start watching this issue

              Dates

                Created:
                Updated:
                Resolved:

                Git Integration

                  Error rendering 'com.xiplink.jira.git.jira_git_plugin:git-issue-webpanel'. Please contact your Jira administrators.