[MDEV-6590] InnoDB recover ends in signal 11 - Jira

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Type: Bug
Status: Closed (View Workflow)
Priority: Major
Resolution: Fixed
Affects Version/s: 10.0.13
Fix Version/s: 10.0.14
Component/s: None
Labels:
- innodb
Environment:

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Linux exa 3.12.21-gentoo-r1 #1 SMP Mon Aug 11 23:38:40 CEST 2014 x86_64 Intel(R) Core(TM) i7-2600K CPU @ 3.40GHz GenuineIntel GNU/Linux

LSB Version: n/a
Distributor ID: Gentoo
Description: Gentoo Base System release 2.2
Release: 2.2
Codename: n/a

Portage 2.2.8-r1 (default/linux/amd64/13.0/desktop/kde, gcc-4.8.3, glibc-2.19-r1, 3.12.21-gentoo-r1 x86_64)
=================================================================
System uname: Linux-3.12.21-gentoo-r1-x86_64-Intel-R-_Core-TM-_i7-2600K_CPU_@_3.40GHz-with-gentoo-2.2
KiB Mem: 16397384 total, 1930272 free
KiB Swap: 16776188 total, 16773536 free
Timestamp of tree: Fri, 15 Aug 2014 10:15:01 +0000
ld GNU ld (Gentoo 2.23.2 p1.0) 2.23.2
app-shells/bash: 4.2_p45
dev-java/java-config: 2.2.0
dev-lang/python: 2.7.7, 3.3.5-r1
dev-util/cmake: 2.8.12.2-r1
dev-util/pkgconfig: 0.28-r1
sys-apps/baselayout: 2.2
sys-apps/openrc: 0.12.4
sys-apps/sandbox: 2.6-r1
sys-devel/autoconf: 2.13, 2.69
sys-devel/automake: 1.11.6, 1.12.6, 1.13.4
sys-devel/binutils: 2.23.2
sys-devel/gcc: 4.7.3-r1, 4.8.3
sys-devel/gcc-config: 1.7.3
sys-devel/libtool: 2.4.2-r1
sys-devel/make: 3.82-r4
sys-kernel/linux-headers: 3.13 (virtual/os-headers)
sys-libs/glibc: 2.19-r1
Repositories: gentoo javer x-portage
ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=corei7-avx -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt /usr/share/themes/oxygen-gtk/gtk-2.0"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.3/ext-active/ /etc/php/apache2-php5.4/ext-active/ /etc/php/apache2-php5.5/ext-active/ /etc/php/cgi-php5.3/ext-active/ /etc/php/cgi-php5.4/ext-active/ /etc/php/cgi-php5.5/ext-active/ /etc/php/cli-php5.3/ext-active/ /etc/php/cli-php5.4/ext-active/ /etc/php/cli-php5.5/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-march=corei7-avx -O2 -pipe"
DISTDIR="/usr/portage/distfiles"
EMERGE_DEFAULT_OPTS="--jobs=8 --load-average=8 --ask"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="ftp://de-mirror.org/gentoo/ http://de-mirror.org/gentoo/ ftp://ftp.wh2.tu-dresden.de/pub/mirrors/gentoo http://gentoo.mneisen.org/ http://mirror.netcologne.de/gentoo/ ftp://mirror.netcologne.de/gentoo/ http://linux.rz.ruhr-uni-bochum.de/download/gentoo-mirror/ ftp://ftp.halifax.rwth-aachen.de/gentoo/ http://ftp.halifax.rwth-aachen.de/gentoo/ ftp://sunsite.informatik.rwth-aachen.de/pub/Linux/gentoo ftp://ftp.spline.inf.fu-berlin.de/mirrors/gentoo/ http://ftp.spline.inf.fu-berlin.de/mirrors/gentoo/ ftp://ftp.uni-erlangen.de/pub/mirrors/gentoo http://ftp.uni-erlangen.de/pub/mirrors/gentoo ftp://ftp-stud.hs-esslingen.de/pub/Mirrors/gentoo/ http://ftp-stud.hs-esslingen.de/pub/Mirrors/gentoo/"
LANG="de_DE.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j9 -l8"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/var/lib/layman/javer /usr/local/portage"
SYNC="rsync://rsync.de.gentoo.org/gentoo-portage"
USE="X a52 aac aacplus acl acpi aim alsa amd64 ao audiofile avahi avx bash-completion berkdb bluetooth branding bzip2 cairo cdda cddb cdr cli consolekit cracklib crypt css cups cvs cxx dbus declarative djvu dri dts dv dvb dvd dvdr emboss encode exif fam ffmpeg firefox flac fontconfig fortran ftp gd gdbm gif gimp git gmp gpm graphviz gsm gstreamer gtk gzip iconv icq icu idn imagemagick imap inotify ipv6 jabber joystick jpeg jpeg2k kde kipi lame latex lcms ldap libass libnotify libwww lm_sensors lzma lzo mad matroska mime mmx mng modules mp3 mp4 mpeg mpi msn multilib mysql mysqli ncurses networkmanager nfs nls nntp nptl nsplugin ogg openal openexr opengl openmp openssl osc oscar pam pango pcntl pcre pdf phonon plasma png policykit ppds pulseaudio qt3support qt4 quicktime rar raw rdesktop readline recode rss samba sasl scanner sdl semantic-desktop session soap sound speex spell sse sse2 ssl startup-notification static-libs subversion svg szip tcpd theora threads tiff timidity truetype udev udisks unicode upower usb v4l vaapi vcd videos vim-syntax vnc vorbis wmf wxwidgets x264 xcb xcomposite xine xinerama xml xmlrpc xmp xscreensaver xsl xv xvid yahoo zeroconf zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation proxy proxy_ajp proxy_balancer proxy_connect proxy_ftp proxy_http rewrite setenvif speling status unique_id usertrack vhost_alias" APACHE2_MPMS="event" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="pc efi-32 efi-64" INPUT_DEVICES="evdev keyboard mouse wacom" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="de" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5 php5-4 php5-3" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_3" RUBY_TARGETS="ruby19 ruby20" USERLAND="GNU" VIDEO_CARDS="dummy fbdev intel nouveau vesa" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset: CPPFLAGS, CTARGET, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON

Show
Linux exa 3.12.21-gentoo-r1 #1 SMP Mon Aug 11 23:38:40 CEST 2014 x86_64 Intel(R) Core(TM) i7-2600K CPU @ 3.40GHz GenuineIntel GNU/Linux LSB Version: n/a Distributor ID: Gentoo Description: Gentoo Base System release 2.2 Release: 2.2 Codename: n/a Portage 2.2.8-r1 (default/linux/amd64/13.0/desktop/kde, gcc-4.8.3, glibc-2.19-r1, 3.12.21-gentoo-r1 x86_64) ================================================================= System uname: Linux-3.12.21-gentoo-r1-x86_64-Intel-R-_Core-TM-_i7-2600K_CPU_@_3.40GHz-with-gentoo-2.2 KiB Mem: 16397384 total, 1930272 free KiB Swap: 16776188 total, 16773536 free Timestamp of tree: Fri, 15 Aug 2014 10:15:01 +0000 ld GNU ld (Gentoo 2.23.2 p1.0) 2.23.2 app-shells/bash: 4.2_p45 dev-java/java-config: 2.2.0 dev-lang/python: 2.7.7, 3.3.5-r1 dev-util/cmake: 2.8.12.2-r1 dev-util/pkgconfig: 0.28-r1 sys-apps/baselayout: 2.2 sys-apps/openrc: 0.12.4 sys-apps/sandbox: 2.6-r1 sys-devel/autoconf: 2.13, 2.69 sys-devel/automake: 1.11.6, 1.12.6, 1.13.4 sys-devel/binutils: 2.23.2 sys-devel/gcc: 4.7.3-r1, 4.8.3 sys-devel/gcc-config: 1.7.3 sys-devel/libtool: 2.4.2-r1 sys-devel/make: 3.82-r4 sys-kernel/linux-headers: 3.13 (virtual/os-headers) sys-libs/glibc: 2.19-r1 Repositories: gentoo javer x-portage ACCEPT_KEYWORDS="amd64" ACCEPT_LICENSE="*" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=corei7-avx -O2 -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt /usr/share/themes/oxygen-gtk/gtk-2.0" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.3/ext-active/ /etc/php/apache2-php5.4/ext-active/ /etc/php/apache2-php5.5/ext-active/ /etc/php/cgi-php5.3/ext-active/ /etc/php/cgi-php5.4/ext-active/ /etc/php/cgi-php5.5/ext-active/ /etc/php/cli-php5.3/ext-active/ /etc/php/cli-php5.4/ext-active/ /etc/php/cli-php5.5/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-march=corei7-avx -O2 -pipe" DISTDIR="/usr/portage/distfiles" EMERGE_DEFAULT_OPTS="--jobs=8 --load-average=8 --ask" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync" FFLAGS="-O2 -pipe" GENTOO_MIRRORS=" ftp://de-mirror.org/gentoo/ http://de-mirror.org/gentoo/ ftp://ftp.wh2.tu-dresden.de/pub/mirrors/gentoo http://gentoo.mneisen.org/ http://mirror.netcologne.de/gentoo/ ftp://mirror.netcologne.de/gentoo/ http://linux.rz.ruhr-uni-bochum.de/download/gentoo-mirror/ ftp://ftp.halifax.rwth-aachen.de/gentoo/ http://ftp.halifax.rwth-aachen.de/gentoo/ ftp://sunsite.informatik.rwth-aachen.de/pub/Linux/gentoo ftp://ftp.spline.inf.fu-berlin.de/mirrors/gentoo/ http://ftp.spline.inf.fu-berlin.de/mirrors/gentoo/ ftp://ftp.uni-erlangen.de/pub/mirrors/gentoo http://ftp.uni-erlangen.de/pub/mirrors/gentoo ftp://ftp-stud.hs-esslingen.de/pub/Mirrors/gentoo/ http://ftp-stud.hs-esslingen.de/pub/Mirrors/gentoo/ " LANG="de_DE.UTF-8" LDFLAGS="-Wl,-O1 -Wl,--as-needed" MAKEOPTS="-j9 -l8" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/var/lib/layman/javer /usr/local/portage" SYNC=" rsync://rsync.de.gentoo.org/gentoo-portage " USE="X a52 aac aacplus acl acpi aim alsa amd64 ao audiofile avahi avx bash-completion berkdb bluetooth branding bzip2 cairo cdda cddb cdr cli consolekit cracklib crypt css cups cvs cxx dbus declarative djvu dri dts dv dvb dvd dvdr emboss encode exif fam ffmpeg firefox flac fontconfig fortran ftp gd gdbm gif gimp git gmp gpm graphviz gsm gstreamer gtk gzip iconv icq icu idn imagemagick imap inotify ipv6 jabber joystick jpeg jpeg2k kde kipi lame latex lcms ldap libass libnotify libwww lm_sensors lzma lzo mad matroska mime mmx mng modules mp3 mp4 mpeg mpi msn multilib mysql mysqli ncurses networkmanager nfs nls nntp nptl nsplugin ogg openal openexr opengl openmp openssl osc oscar pam pango pcntl pcre pdf phonon plasma png policykit ppds pulseaudio qt3support qt4 quicktime rar raw rdesktop readline recode rss samba sasl scanner sdl semantic-desktop session soap sound speex spell sse sse2 ssl startup-notification static-libs subversion svg szip tcpd theora threads tiff timidity truetype udev udisks unicode upower usb v4l vaapi vcd videos vim-syntax vnc vorbis wmf wxwidgets x264 xcb xcomposite xine xinerama xml xmlrpc xmp xscreensaver xsl xv xvid yahoo zeroconf zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation proxy proxy_ajp proxy_balancer proxy_connect proxy_ftp proxy_http rewrite setenvif speling status unique_id usertrack vhost_alias" APACHE2_MPMS="event" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="pc efi-32 efi-64" INPUT_DEVICES="evdev keyboard mouse wacom" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="de" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5 php5-4 php5-3" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_3" RUBY_TARGETS="ruby19 ruby20" USERLAND="GNU" VIDEO_CARDS="dummy fbdev intel nouveau vesa" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CPPFLAGS, CTARGET, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON

Description

Some days ago, I need to reset my local system (press the reset button) because it was frozen.
After reboot, mariadb won't start up, here is the output from the log file:

140815 15:09:42 [Warning] No argument was provided to --log-bin and neither --log-basename or --log-bin-index where used;  This may cause repliction to break when this server acts as a master and has its hostname changed! Please use '--log-basename=exa' or '--log-bin=mysqld-bin' to avoid this problem.

140815 15:09:42 [Note] CONNECT: Version 1.03.0002 Aug 15 2014 15:05:37

140815 15:09:42 [Note] InnoDB: Using mutexes to ref count buffer pool pages

140815 15:09:42 [Note] InnoDB: The InnoDB memory heap is disabled

140815 15:09:42 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins

140815 15:09:42 [Note] InnoDB: Compressed tables use zlib 1.2.8

140815 15:09:42 [Note] InnoDB: Using Linux native AIO

140815 15:09:42 [Note] InnoDB: Using CPU crc32 instructions

140815 15:09:42 [Note] InnoDB: Initializing buffer pool, size = 64.0M

140815 15:09:42 [Note] InnoDB: Completed initialization of buffer pool

140815 15:09:42 [Note] InnoDB: Highest supported file format is Barracuda.

140815 15:09:42 [Note] InnoDB: Log scan progressed past the checkpoint lsn 3359224610

140815 15:09:42 [Note] InnoDB: Database was not shutdown normally!

140815 15:09:42 [Note] InnoDB: Starting crash recovery.

140815 15:09:42 [Note] InnoDB: Reading tablespace information from the .ibd files...

140815 15:09:42 [Note] InnoDB: Restoring possible half-written data pages

140815 15:09:42 [Note] InnoDB: from the doublewrite buffer...

InnoDB: Doing recovery: scanned up to log sequence number 3359225074

140815 15:09:42 [Note] InnoDB: Starting an apply batch of log records to the database...

InnoDB: Progress in percent: 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99

InnoDB: Apply batch completed

InnoDB: Last MySQL binlog file position 0 203636560, file name ./mysqld-bin.000039

140815 15:09:42 [ERROR] mysqld got signal 11 ;

This could be because you hit a bug. It is also possible that this binary

or one of the libraries it was linked against is corrupt, improperly built,

or misconfigured. This error can also be caused by malfunctioning hardware.

To report this bug, see http://kb.askmonty.org/en/reporting-bugs

We will try our best to scrape up some info that will hopefully help

diagnose the problem, but since we have already crashed,

something is definitely wrong and this may fail.

Server version: 10.0.13-MariaDB-log

key_buffer_size=67108864

read_buffer_size=1048576

max_used_connections=0

max_threads=153

thread_count=0

It is possible that mysqld could use up to

key_buffer_size + (read_buffer_size + sort_buffer_size)*max_threads = 538697 K  bytes of memory

Hope that's ok; if not, decrease some variables in the equation.

Thread pointer: 0x0x0

Attempting backtrace. You can use the following information to find out

where mysqld died. If you see no messages after this, something went

terribly wrong...

stack_bottom = 0x0 thread_stack 0x48000

/usr/sbin/mysqld(my_print_stacktrace+0x29)[0xb30f79]

/usr/sbin/mysqld(handle_fatal_signal+0x398)[0x6f2658]

/lib64/libpthread.so.0(+0x11260)[0x7f3c9564a260]

:0(dict_get_first_path(unsigned long, char const*))[0x9d4a08]

:0(dict_check_tablespaces_and_store_max_id(dict_check_t))[0x9d59a4]

:0(innobase_start_or_create_for_mysql())[0x9533f1]

ha_innodb.cc:0(innobase_init(void*))[0x8ad168]

/usr/sbin/mysqld(_Z24ha_initialize_handlertonP13st_plugin_int+0x57)[0x6f4797]

sql_plugin.cc:0(plugin_initialize(st_mem_root*, st_plugin_int*, int*, char**, bool))[0x5ce8ca]

/usr/sbin/mysqld(_Z11plugin_initPiPPci+0x4ab)[0x5cf4ab]

mysqld.cc:0(init_server_components())[0x5492a7]

/usr/sbin/mysqld(_Z11mysqld_mainiPPc+0x3e0)[0x54d290]

/lib64/libc.so.6(__libc_start_main+0xf5)[0x7f3c94255db5]

/usr/sbin/mysqld[0x5430e5]

The manual page at http://dev.mysql.com/doc/mysql/en/crashing.html contains

information that should help you find out what is causing the crash.

The startup fails every time I try.
Moving /var/lib/mysql away and reinstall the tables works, so it seems to be a problem with the existing tables.

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my.cnf
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2014-08-15 16:31

Activity

People

Assignee:: Jan Lindström (Inactive)

Reporter:: Tristan Lins

Votes:: 0 Vote for this issue

Watchers:: 4 Start watching this issue

Dates

Created:: 2014-08-15 16:30

Updated:: 2014-08-26 08:33

Resolved:: 2014-08-25 13:40

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