[MDEV-30357] Performance regression in locking reads from secondary indexes - Jira

Details

Type: Bug
Status: Closed (View Workflow)
Priority: Critical
Resolution: Fixed
Affects Version/s: 10.9.0, 10.6.8, 10.6.9, 10.7.4, 10.8.3, 10.10.0, 10.6.10, 10.6.11, 11.0.0, 10.6.12
Fix Version/s: 10.11.3, 11.0.2, 10.6.13, 10.8.8, 10.9.6, 10.10.4
Component/s: Storage Engine - InnoDB
Labels:
- performance
- regression-10.6
Environment:
Issue is both on linux (Centos 7) and Windows 10.

Description

Since updating from MariaDB 10.3.35 to 10.6.11 one of our query's which used to take around 1min 30sec, is now still in the Sending data stage after more then an hour. I've kept it running for hours (3 or 4), but it wouldn't finish.

I've tested every version from 10.3 till 10.6, all versions work fine (same timing as 10.3) right up until version 10.6.7. The issue starts from version 10.6.8.

I have also tried the latest 10.10.2, which also does not work, which means this does appear to be a bug that's yet to be fixed.

Row counts for the tables are:
Afkomst: ~145k
Automatch: ~67m
Werkzoeker: ~300k

The query itself isn't particularly difficult or complex. I've even put the two tables the WHERE is on inside a temporary table so it just becomes one join, which did not help.

I did try limiting the row count for Werkzoeker to a much lower (6k instead of 300k) sub-set, and that did work. So it appears it either is a performance issue (one that's pretty bad), or one that chokes on a bigger row count.

SET @LeeftijdHulpVan = 16;

SET @LeeftijdHulpTot = 99;

SET @Afkomst = 'Alle';

CREATE TEMPORARY TABLE `AantalAutomatches` (PRIMARY KEY(WerkzoekerId)) AS (

    SELECT WerkzoekerId, COUNT(*) AS AantalAutomatch FROM `Automatch`

    JOIN Werkzoeker ON Automatch.WerkzoekerId = Werkzoeker.Id

    LEFT JOIN Afkomst ON Afkomst.UserId = Werkzoeker.Id AND Afkomst.UserType = 'Werk'

    WHERE TIMESTAMPDIFF(YEAR, Werkzoeker.Geboortedatum, CURDATE()) BETWEEN @LeeftijdHulpVan AND @LeeftijdHulpTot AND

        IF(@Afkomst != 'Alle', Afkomst.Source = @Afkomst, 1)

    GROUP BY WerkzoekerId

);

Show create table for the 3 tables:

CREATE TABLE `Afkomst` (

  `Id` int(11) NOT NULL AUTO_INCREMENT,

  `Source` varchar(255) COLLATE utf8mb4_unicode_520_ci DEFAULT NULL,

  `Name` varchar(255) COLLATE utf8mb4_unicode_520_ci DEFAULT NULL,

  `Medium` varchar(255) COLLATE utf8mb4_unicode_520_ci DEFAULT NULL,

  `Content` varchar(255) COLLATE utf8mb4_unicode_520_ci DEFAULT NULL,

  `Term` varchar(255) COLLATE utf8mb4_unicode_520_ci DEFAULT NULL,

  `UserType` enum('Zorg','Werk') COLLATE utf8mb4_unicode_520_ci DEFAULT NULL,

  `UserId` int(11) DEFAULT NULL,

  PRIMARY KEY (`Id`),

  UNIQUE KEY `UserAfkomst` (`UserId`,`UserType`)

) ENGINE=InnoDB AUTO_INCREMENT=145656 DEFAULT CHARSET=utf8mb4 COLLATE=utf8mb4_unicode_520_ci;

CREATE TABLE `Automatch` (

  `Id` bigint(20) unsigned NOT NULL AUTO_INCREMENT,

  `ZorgaanvraagId` int(8) NOT NULL,

  `ZorgaanvraagAutomatchLoop` int(5) NOT NULL,

  `WerkzoekerId` int(8) NOT NULL,

  `TijdstipToegevoegd` datetime DEFAULT NULL,

  `TijdstipAppNotificatieVerstuurd` datetime DEFAULT NULL,

  `TijdstipWhatsAppNotificatieVerstuurd` datetime DEFAULT NULL,

  `TijdstipSmsVerstuurd` datetime DEFAULT NULL,

  `TijdstipMailVerstuurd` datetime DEFAULT NULL,

  `TijdstipHerinneringMailVerstuurd` datetime DEFAULT NULL,

  `ReactieWerkzoeker` enum('onbekend','geaccepteerd','afgewezen','bekeken') COLLATE utf8mb4_unicode_520_ci NOT NULL,

  PRIMARY KEY (`Id`),

  KEY `ZorgaanvraagWerkzoeker` (`ZorgaanvraagId`,`ZorgaanvraagAutomatchLoop`,`WerkzoekerId`),

  KEY `Zorgaanvraag` (`ZorgaanvraagId`,`ZorgaanvraagAutomatchLoop`),

  KEY `ZorgaanvraagId` (`ZorgaanvraagId`,`WerkzoekerId`),

  KEY `Werkzoeker` (`WerkzoekerId`)

) ENGINE=InnoDB AUTO_INCREMENT=67983079 DEFAULT CHARSET=utf8mb4 COLLATE=utf8mb4_unicode_520_ci ROW_FORMAT=COMPACT

CREATE TABLE `Werkzoeker` (

  `Id` int(8) unsigned NOT NULL AUTO_INCREMENT,

  `User` varchar(250) COLLATE utf8mb4_unicode_520_ci NOT NULL,

  `Wachtwoord` varchar(512) COLLATE utf8mb4_unicode_520_ci NOT NULL,

  `Voorletters` varchar(8) COLLATE utf8mb4_unicode_520_ci DEFAULT NULL,

  `Voornaam` varchar(50) COLLATE utf8mb4_unicode_520_ci NOT NULL,

  `Tussenvoegsel` varchar(10) COLLATE utf8mb4_unicode_520_ci DEFAULT NULL,

  `Achternaam` varchar(50) COLLATE utf8mb4_unicode_520_ci NOT NULL,

  `Straat` varchar(50) COLLATE utf8mb4_unicode_520_ci NOT NULL,

  `Huisnummer` varchar(120) COLLATE utf8mb4_unicode_520_ci NOT NULL,

  `Toevoeging` varchar(15) COLLATE utf8mb4_unicode_520_ci DEFAULT NULL,

  `Postcode` varchar(6) COLLATE utf8mb4_unicode_520_ci NOT NULL,

  `Woonplaats` varchar(50) COLLATE utf8mb4_unicode_520_ci NOT NULL,

  `Geboortedatum` date DEFAULT NULL,

  `Nationaliteit` varchar(255) COLLATE utf8mb4_unicode_520_ci NOT NULL,

  `Geslacht` char(1) COLLATE utf8mb4_unicode_520_ci NOT NULL,

  `Rekeningnummer` varchar(20) COLLATE utf8mb4_unicode_520_ci DEFAULT NULL,

  `Iban` varchar(255) COLLATE utf8mb4_unicode_520_ci DEFAULT NULL,

  `RekeningnummerUpdate` datetime DEFAULT NULL,

  `SepaAmendment` tinyint(1) NOT NULL DEFAULT 0,

  `Mandaat` smallint(6) DEFAULT NULL,

  `TenNameVan` varchar(255) COLLATE utf8mb4_unicode_520_ci DEFAULT NULL,

  `BankPlaats` varchar(50) COLLATE utf8mb4_unicode_520_ci DEFAULT NULL,

  `TelefoonnummerDag` varchar(20) COLLATE utf8mb4_unicode_520_ci DEFAULT NULL,

  `TelefoonnummerAvond` varchar(20) COLLATE utf8mb4_unicode_520_ci DEFAULT NULL,

  `Emailadres` varchar(50) COLLATE utf8mb4_unicode_520_ci NOT NULL,

  `Kilometers` tinyint(4) NOT NULL,

  `UrenBeschikbaar` tinyint(2) NOT NULL,

  `Opmerkingen` mediumtext COLLATE utf8mb4_unicode_520_ci DEFAULT NULL,

  `Actief` tinyint(1) NOT NULL DEFAULT 0,

  `Activatiesleutel` varchar(32) COLLATE utf8mb4_unicode_520_ci NOT NULL,

  `Aanmelddatum` timestamp NOT NULL DEFAULT current_timestamp(),

  `Activatiedatum` datetime DEFAULT NULL,

  `LogboekOud` longtext COLLATE utf8mb4_unicode_520_ci DEFAULT NULL,

  `Betalingsregeling` longtext COLLATE utf8mb4_unicode_520_ci DEFAULT NULL,

  `HeeftBetalingsregeling` tinyint(1) NOT NULL DEFAULT 0,

  `AantalTermijnen` int(5) DEFAULT NULL,

  `Termijn` enum('week','maand') COLLATE utf8mb4_unicode_520_ci DEFAULT NULL,

  `EinddatumBetalingsregeling` date DEFAULT NULL,

  `MagPuntenInwisselen` enum('Ja','Nee','Systeem') COLLATE utf8mb4_unicode_520_ci NOT NULL DEFAULT 'Systeem',

  `HerinneringsMail` int(2) NOT NULL DEFAULT 0,

  `PersoonlijkeInfo` mediumtext COLLATE utf8mb4_unicode_520_ci DEFAULT NULL,

  `Ervaringtekst` mediumtext COLLATE utf8mb4_unicode_520_ci DEFAULT NULL,

  `SiteId` int(11) NOT NULL,

  `Lat` decimal(11,8) NOT NULL,

  `Lng` decimal(11,8) NOT NULL,

  `Beschikbaarheid` varchar(20) COLLATE utf8mb4_unicode_520_ci DEFAULT NULL,

  `AlternatiefMailadres` varchar(255) COLLATE utf8mb4_unicode_520_ci DEFAULT NULL,

  `SmsCredits` int(11) NOT NULL DEFAULT 0,

  `SmsAan` tinyint(1) NOT NULL DEFAULT 1,

  `Ip` varchar(20) COLLATE utf8mb4_unicode_520_ci DEFAULT NULL,

  `Werkvergunning` varchar(3) COLLATE utf8mb4_unicode_520_ci DEFAULT NULL,

  `Machtiging` enum('n','y') COLLATE utf8mb4_unicode_520_ci NOT NULL DEFAULT 'n',

  `MachtigingVerstuurd` tinyint(1) NOT NULL DEFAULT 0,

  `MachtigingIngevoerd` datetime DEFAULT NULL,

  `OntvangAanvragen` enum('n','y') COLLATE utf8mb4_unicode_520_ci NOT NULL DEFAULT 'y',

  `Referentie` mediumtext COLLATE utf8mb4_unicode_520_ci DEFAULT NULL,

  `UitLakslijst` int(11) NOT NULL DEFAULT 0,

  `VakantieVan` date DEFAULT NULL,

  `VakantieTot` date DEFAULT NULL,

  `VakantieType` enum('Vakantie','Zwangerschapsverlof') COLLATE utf8mb4_unicode_520_ci DEFAULT NULL,

  `GegevensDelen` tinyint(1) NOT NULL DEFAULT 1,

  `GooglePlaces` tinyint(1) NOT NULL DEFAULT 0,

  `Uitgeschreven` enum('n','y') COLLATE utf8mb4_unicode_520_ci NOT NULL DEFAULT 'n',

  `ReferralType` enum('AffiliateHiH','Werkzoeker') COLLATE utf8mb4_unicode_520_ci DEFAULT NULL,

  `ReferralGebruikerId` int(8) unsigned DEFAULT NULL,

  `AffiliateGebruikerId` int(11) DEFAULT NULL,

  `HeeftAfkoopSom` tinyint(1) NOT NULL DEFAULT 0,

  `Mailing` int(11) NOT NULL DEFAULT 0,

  `Foto` varchar(255) COLLATE utf8mb4_unicode_520_ci DEFAULT NULL,

  `FotoGecontroleerd` tinyint(1) NOT NULL DEFAULT 0,

  `SepaStatus` enum('FRST','RCUR') COLLATE utf8mb4_unicode_520_ci NOT NULL DEFAULT 'FRST',

  `AanbiedingenGehad` int(11) NOT NULL DEFAULT 0,

  `MailingOptOut` tinyint(1) NOT NULL DEFAULT 0,

  `Zorgverzekeraar` int(11) NOT NULL DEFAULT 19,

  `Polisnummer` varchar(30) COLLATE utf8mb4_unicode_520_ci DEFAULT NULL,

  `ZorgverzekeringBeschikbaar` enum('ja','nee','onbekend') COLLATE utf8mb4_unicode_520_ci NOT NULL DEFAULT 'onbekend',

  `ZorgAkkoord` tinyint(1) NOT NULL DEFAULT 0,

  `LaatsteLoginDatum` datetime DEFAULT NULL,

  `MailingOntvangen` smallint(5) unsigned NOT NULL DEFAULT 0,

  `AutomatchLaatsteRun` datetime DEFAULT NULL,

  `KwaliteitScore` decimal(5,2) DEFAULT NULL,

  `JaarWerkervaring` tinyint(3) unsigned DEFAULT NULL,

  `BesteContactUur` int(2) unsigned DEFAULT NULL,

  `HeeftVoorwaardenGeaccepteerd` tinyint(1) unsigned NOT NULL DEFAULT 0,

  `DatumVoorwaardenGeaccepteerd` datetime DEFAULT NULL,

  `DubbelGecontroleerd` tinyint(1) unsigned NOT NULL DEFAULT 0,

  `TranslateLang` varchar(10) COLLATE utf8mb4_unicode_520_ci DEFAULT NULL,

  `NummerNietInGebruik` tinyint(4) NOT NULL DEFAULT 0,

  PRIMARY KEY (`Id`),

  UNIQUE KEY `user` (`User`),

  UNIQUE KEY `activatiesleutel` (`Activatiesleutel`),

  KEY `emailadres` (`Emailadres`),

  KEY `postcode` (`Postcode`),

  KEY `achternaam` (`Achternaam`),

  KEY `Lat` (`Lat`),

  KEY `Lng` (`Lng`),

  KEY `woonplaats` (`Woonplaats`),

  KEY `straat` (`Straat`),

  KEY `woonplaats&straat` (`Woonplaats`,`Straat`),

  KEY `gebdatum` (`Geboortedatum`),

  KEY `KwaliteitScore` (`KwaliteitScore`),

  KEY `LngLatLogin` (`Lng`,`Lat`,`LaatsteLoginDatum`) USING BTREE,

  KEY `BesteContactUur` (`BesteContactUur`),

  FULLTEXT KEY `woonplaats_TEXT` (`Woonplaats`)

) ENGINE=InnoDB AUTO_INCREMENT=292240 DEFAULT CHARSET=utf8mb4 COLLATE=utf8mb4_unicode_520_ci;

Explain extended:

+------+-------------+------------+--------+---------------+-------------+---------+----------------------------+--------+----------+-----------------------------------------------------------+

| id   | select_type | table      | type   | possible_keys | key         | key_len | ref                        | rows   | filtered | Extra                                                     |

+------+-------------+------------+--------+---------------+-------------+---------+----------------------------+--------+----------+-----------------------------------------------------------+

|    1 | SIMPLE      | Werkzoeker | index  | PRIMARY       | gebdatum    | 4       | NULL                       | 298809 |   100.00 | Using where; Using index; Using temporary; Using filesort |

|    1 | SIMPLE      | Afkomst    | eq_ref | UserAfkomst   | UserAfkomst | 7       | pgb_db.Werkzoeker.Id,const | 1      |   100.00 | Using where                                               |

|    1 | SIMPLE      | Automatch  | ref    | Werkzoeker    | Werkzoeker  | 4       | pgb_db.Werkzoeker.Id       | 124    |   100.00 | Using where; Using index                                  |

+------+-------------+------------+--------+---------------+-------------+---------+----------------------------+--------+----------+-----------------------------------------------------------+

3 rows in set, 1 warning (0.003 sec)

I am able to provide database dumps for these tables if needed (Which is around 7.5GB).

Please let me know if you need anything else from me, happy to help to get this issue resolved.

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MDEV-30357.test
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2023-03-01 16:27
flame-10.5.svg
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2023-03-01 21:28
flame-10.6.svg
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2023-03-01 21:28

Issue Links

is caused by

MDEV-28445 Secondary index locking invokes costly trx_sys.get_min_trx_id()

Closed

relates to

MDEV-20630 lf_hash get performance regression since the bucket size won't decrease

Confirmed

MDEV-21423 lock-free trx_sys get performance regression cause by lf_find and ut_delay

Stalled

Performance regression in locking reads from secondary indexes

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