Alter table changes frm file to UpperCase in Windows Creators Update

After installing the creators update I noticed that tables didn't show up anymore after altering a table to add a column.

I have lower_case_table_names variable set on my system to:
lower_case_table_names = 2

Procedure:

CREATE TABLE IF NOT EXISTS `repository_1`.`Table_1` (ID INTEGER NOT NULL PRIMARY KEY AUTO_INCREMENT) ENGINE = INNODB

Results in two files:
Table_1.frm
table_1.ibd

Show tables command shows me Table_1.

ALTER TABLE `repository_1`.`Table_1` ADD COLUMN `Column_1` TEXT NULL

Results in two files:
TABLE_1.FRM
table_1.ibd

Show tables command does not return Table_1. Although DESCRIBE Table_1 does:

Changing the lower_case_table_names to use value 1 works but all my tables and files are lowercase which is not what I want.